RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 E2F8A0AVK6 867 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 BEST1O76090 585 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 CCDC130P13994 396 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 MXI1P50539 228 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
LRTM1-202ENST00000493075 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 WHAMMQ8TF30 809 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
LRTM1-202ENST00000493075 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 TBC1D14Q9P2M4 693 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
LRTM1-202ENST00000493075 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
LRTM1-202ENST00000493075 COQ4Q9Y3A0 265 aa12.16□□□□□ -0.46
LRTM1-202ENST00000493075 COCHO43405 550 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 EGFP01133 1207 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 MBL2P11226 248 aaPredicted RBP12.15□□□□□ -0.46
LRTM1-202ENST00000493075 ORC1Q13415 861 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 STIM1Q13586 685 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 FOXR2Q6PJQ5 311 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 CLEC20AQ6ZU45 233 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 WDR5BQ86VZ2 330 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 CAMKK1Q8N5S9 505 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 SEMA4DQ92854 862 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 OTUB2Q96DC9 234 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 EEF2KMTQ96G04 330 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 DUSP16Q9BY84 665 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
LRTM1-202ENST00000493075 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
LRTM1-202ENST00000493075 FAM49BQ9NUQ9 324 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 NCDNQ9UBB6 729 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 SCML2Q9UQR0 700 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 MIA3Q5JRA6 1907 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 TICRRQ7Z2Z1 1910 aa12.15□□□□□ -0.46
LRTM1-202ENST00000493075 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 HHLA1C9JL84 531 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 PSMA7O14818 248 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 PMM2O15305 246 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 HRO43593 1189 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 RNF40O75150 1001 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 CD58P19256 250 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 ADORA2BP29275 332 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 EIF2DP41214 584 aaKnown RBP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 FNTBP49356 437 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 DHCR24Q15392 516 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 ZNF276Q8N554 614 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 DCLK2Q8N568 766 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 CEP63Q96MT8 703 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 GMIPQ9P107 970 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 ARMCX3Q9UH62 379 aaPredicted RBP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 RAB23Q9ULC3 237 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
LRTM1-202ENST00000493075 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
LRTM1-202ENST00000493075 ADH1CP00326 375 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CYP17A1P05093 508 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 OPRD1P41143 372 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 PSEN1P49768 467 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 KIF11P52732 1056 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 DMWDQ09019 674 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
LRTM1-202ENST00000493075 GAB4Q2WGN9 574 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CBWD6Q4V339 395 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
LRTM1-202ENST00000493075 ARHGAP17Q68EM7 881 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 PKN3Q6P5Z2 889 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 RHBDF2Q6PJF5 856 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 EZH1Q92800 747 aaPredicted RBP12.13□□□□□ -0.47
LRTM1-202ENST00000493075 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
LRTM1-202ENST00000493075 TATDN2Q93075 761 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 TMEM176AQ96HP8 235 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 HEXIM2Q96MH2 286 aaKnown RBP12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CCSER2Q9H7U1 834 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 PATJQ8NI35 1801 aa12.13□□□□□ -0.47
LRTM1-202ENST00000493075 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms