RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NR2F2P24468 414 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 GTF2H1P32780 548 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 NDUFA8P51970 172 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 DLG4P78352 724 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 ZXDBP98169 803 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 SRSF5Q13243 272 aaKnown RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 DMC1Q14565 340 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 DHCR24Q15392 516 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 ELF2Q15723 593 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 USP39Q53GS9 565 aaKnown RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 BTBD8Q5XKL5 378 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 PKN3Q6P5Z2 889 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 GTPBP4Q9BZE4 634 aaKnown RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 NACA2Q9H009 215 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 FAM124BQ9H5Z6 455 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 TLR8Q9NR97 1041 aaKnown RBP13.2□□□□□ -0.3
COL6A1-205ENST00000492851 SMPD4Q9NXE4 827 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 CFAP97Q9P2B7 532 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-205ENST00000492851 STX10O60499 249 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 APODP05090 189 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 ZDHHC11BP0C7U3 371 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 GRIA2P42262 883 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 TNFRSF4P43489 277 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 PXNP49023 591 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-205ENST00000492851 DGKEP52429 567 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 NDST1P52848 882 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 SLC5A3P53794 718 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 GAD2Q05329 585 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 DPYDQ12882 1025 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 ADAM9Q13443 819 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 FAM186BQ8IYM0 893 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 NT5C1AQ9BXI3 368 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 PNPLA8Q9NP80 782 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
COL6A1-205ENST00000492851 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
COL6A1-205ENST00000492851 K7EQS6 105 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 COCHO43405 550 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 ZNF202O95125 648 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 EPN2O95208 641 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 CYP17A1P05093 508 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 ADH5P11766 374 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 OPRD1P41143 372 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 PSEN1P49768 467 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 LIMK1P53667 647 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 EDRF1Q3B7T1 1238 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 RHBDF2Q6PJF5 856 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 TRMT11Q7Z4G4 463 aaKnown RBP13.18□□□□□ -0.3
COL6A1-205ENST00000492851 TADA2BQ86TJ2 420 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 HNRNPABQ99729 332 aaKnown RBP13.18□□□□□ -0.3
COL6A1-205ENST00000492851 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 TMEM8AQ9HCN3 771 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 VPS45Q9NRW7 570 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 TMEM30AQ9NV96 361 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 MMP17Q9ULZ9 603 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
COL6A1-205ENST00000492851 KIF26AQ9ULI4 1882 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-205ENST00000492851 DENND4CQ5VZ89 1909 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 GOLGA6L4A6NEF3 574 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 KAT7O95251 611 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 ATP5C1P36542 298 aaKnown RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 ASPAP45381 313 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 MAP3K7CLP57077 242 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 MCCD1P59942 119 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 BYSLQ13895 437 aaKnown RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 PLK5Q496M5 336 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 KRT39Q6A163 491 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 IL31Q6EBC2 164 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms