RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 C12orf40Q86WS4 652 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 SFTPA1Q8IWL2 248 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 DNAJC19Q96DA6 116 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 EPSTI1Q96J88 318 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 ADAMTS9Q9P2N4 1935 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 PTPRJQ12913 1337 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 ABL1P00519 1130 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 IDEP14735 1019 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 GAD2Q05329 585 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 MESP2Q0VG99 397 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 TAF10Q12962 218 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 DUOXA2Q1HG44 320 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 ZNF423Q2M1K9 1284 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 MDH1BQ5I0G3 518 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 RRAGBQ5VZM2 374 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 BTBD8Q5XKL5 378 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 SCARA3Q6AZY7 606 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 PHTF2Q8N3S3 785 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 ZNF513Q8N8E2 541 aaPredicted RBP11.72□□□□□ -0.53
SND1-215ENST00000492772 OR5B17Q8NGF7 314 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 OVCA2Q8WZ82 227 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 DUSP9Q99956 384 aaKnown RBP11.72□□□□□ -0.53
SND1-215ENST00000492772 GTPBP2Q9BX10 602 aaKnown RBP11.72□□□□□ -0.53
SND1-215ENST00000492772 SNX25Q9H3E2 840 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 PCIF1Q9H4Z3 704 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
SND1-215ENST00000492772 MYOFQ9NZM1 2061 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 FAM221BA6H8Z2 402 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 TBC1D3BA6NDS4 549 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 SCAMP3O14828 347 aaKnown RBP11.71□□□□□ -0.53
SND1-215ENST00000492772 ZBTB24O43167 697 aaPredicted RBP11.71□□□□□ -0.53
SND1-215ENST00000492772 HOXC11O43248 304 aaPredicted RBP11.71□□□□□ -0.53
SND1-215ENST00000492772 TACC1O75410 805 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
SND1-215ENST00000492772 PDGFRBP09619 1106 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 LY6G5CQ5SRR4 150 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 EMC10Q5UCC4 262 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
SND1-215ENST00000492772 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 USP49Q70CQ1 688 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 ETFBKMTQ8IXQ9 262 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 MINDY1Q8N5J2 469 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 ZDHHC4Q9NPG8 344 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 CALCOCO1Q9P1Z2 691 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 DEC1Q9P2X7 70 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 FREM2Q5SZK8 3169 aa11.71□□□□□ -0.53
SND1-215ENST00000492772 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.54
SND1-215ENST00000492772 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ARHGAP33O14559 1287 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ZNF217O75362 1048 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 SYPP08247 313 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 HOXB2P14652 356 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 GABRG2P18507 467 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 YWHAQP27348 245 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 GNL1P36915 607 aaPredicted RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 TUBP50607 506 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 TNNC1P63316 161 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ZNF33AQ06730 810 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 IFRD2Q12894 506 aaPredicted RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 C10orf76Q5T2E6 689 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 CCDC73Q6ZRK6 1079 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 RAB44Q7Z6P3 723 aaPredicted RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 PROSER1Q86XN7 944 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 NUP93Q8N1F7 819 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 TERB1Q8NA31 727 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ZFRQ96KR1 1074 aaKnown RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 PANK4Q9NVE7 773 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 DNAAF2Q9NVR5 837 aaKnown RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 SUSD2Q9UGT4 822 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
SND1-215ENST00000492772 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.7□□□□□ -0.54
SND1-215ENST00000492772 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
SND1-215ENST00000492772 IGHV1OR15-9A0A0B4J2B8 117 aa11.69□□□□□ -0.54
SND1-215ENST00000492772 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
SND1-215ENST00000492772 COCHO43405 550 aa11.69□□□□□ -0.54
SND1-215ENST00000492772 TULP3O75386 442 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms