RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 EXOC3O60645 756 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 PHACTR2O75167 634 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 KAT7O95251 611 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 KCNK5O95279 499 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 TRIM21P19474 475 aaKnown RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CSRP1P21291 193 aaKnown RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 HOXD12P35452 270 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CYP2J2P51589 502 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 MYL6P60660 151 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CREB5Q02930 508 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ENPEPQ07075 957 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ST3GAL2Q16842 350 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 SGSM1Q2NKQ1 1148 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 C2orf27AQ580R0 203 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF667Q5HYK9 610 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 N4BP2L1Q5TBK1 243 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 NAIF1Q69YI7 327 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 UNC93AQ86WB7 457 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CRYBG2Q8N1P7 616 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 HPS3Q969F9 1004 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 FAM84AQ96KN4 292 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF830Q96NB3 372 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 FBXO44Q9H4M3 255 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CSNK1G1Q9HCP0 422 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 DMAP1Q9NPF5 467 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 CFAP97Q9P2B7 532 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 KMT2BQ9UMN6 2715 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-212ENST00000492407 STARD13Q9Y3M8 1113 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 ACACBO00763 2458 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 TCHHQ07283 1943 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 DENND4CQ5VZ89 1909 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 PDXKO00764 312 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 CLIC2O15247 247 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 MAPK13O15264 365 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 POLR2DO15514 142 aaKnown RBP9.68□□□□□ -0.86
HDAC3-212ENST00000492407 KIF20AO95235 890 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 C4BPAP04003 597 aaKnown RBP9.68□□□□□ -0.86
HDAC3-212ENST00000492407 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 ADH5P11766 374 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 GBP1P32455 592 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 P2RY2P41231 377 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 KIR2DL1P43626 348 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-212ENST00000492407 LMAN2Q12907 356 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF699Q32M78 642 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 RESP18Q5W5W9 173 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 BTBD8Q5XKL5 378 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 LPCAT2Q7L5N7 544 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 RABEPKQ7Z6M1 372 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 NELFCDQ8IXH7 590 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 ETFBKMTQ8IXQ9 262 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 IL17RCQ8NAC3 791 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 MDGA1Q8NFP4 955 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 FBXO32Q969P5 355 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 SMARCD1Q96GM5 515 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 CHAMP1Q96JM3 812 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 SPACA7Q96KW9 195 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 EDEM2Q9BV94 578 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 BACH2Q9BYV9 841 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF518BQ9C0D4 1074 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 DNAI2Q9GZS0 605 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 PNPLA8Q9NP80 782 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 ARHGEF4Q9NR80 690 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 RXFP3Q9NSD7 469 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
HDAC3-212ENST00000492407 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 NME7Q9Y5B8 376 aa9.68□□□□□ -0.86
HDAC3-212ENST00000492407 DCLK1O15075 740 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 COCHO43405 550 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 ABL1P00519 1130 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CEACAM1P13688 526 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SLC6A11P48066 632 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CACNA2D1P54289 1103 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SEC13P55735 322 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 BIRC3Q13489 604 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 NCOA4Q13772 614 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CCDC6Q16204 474 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 ZACNQ401N2 412 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 PEAR1Q5VY43 1037 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 ANO7Q6IWH7 933 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 KLHDC10Q6PID8 442 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SLC36A4Q6YBV0 504 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 PAQR9Q6ZVX9 377 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 HTR3DQ70Z44 454 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CYP2U1Q7Z449 544 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 FAM35AQ86V20 835 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CEP57L1Q8IYX8 460 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 PHTF2Q8N3S3 785 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms