RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SYKP43405 635 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 PGFP49763 221 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 PPP3CAQ08209 521 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SPEM2Q0P670 501 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 DHCR24Q15392 516 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 PLA2G2CQ5R387 149 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 HEATR6Q6AI08 1181 aaKnown RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 RHBDF2Q6PJF5 856 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 KRBA2Q6ZNG9 492 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 CACNA2D4Q7Z3S7 1137 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 FILIP1Q7Z7B0 1213 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 RASSF3Q86WH2 238 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 DDX42Q86XP3 938 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 ZNF276Q8N554 614 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 CCDC26Q8TAB7 109 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SCAMP5Q8TAC9 235 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 WHAMMQ8TF30 809 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 OTUB2Q96DC9 234 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SMARCD1Q96GM5 515 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SPATA32Q96LK8 384 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 HNRNPABQ99729 332 aaKnown RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SMOQ99835 787 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 RTKNQ9BST9 563 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 GOLPH3LQ9H4A5 285 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 FAM124BQ9H5Z6 455 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 CYP3A43Q9HB55 503 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 APOBEC3GQ9HC16 384 aaKnown RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 DMAP1Q9NPF5 467 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SEMA4GQ9NTN9 838 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 POLR3BQ9NW08 1133 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 TBC1D14Q9P2M4 693 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 EPG5Q9HCE0 2579 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 CALUO43852 315 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 RPP40O75818 363 aaKnown RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ZNF202O95125 648 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 EPN2O95208 641 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 KIF20AO95235 890 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 HLA-DRAP01903 254 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ZNF806P0C7X5 589 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 P4HA1P13674 534 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 GTF2H1P32780 548 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 KIR2DL1P43626 348 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 VAMP7P51809 220 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 NDST1P52848 882 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 LIMK1P53667 647 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC5A3P53794 718 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 MRPS21P82921 87 aaKnown RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 MESP2Q0VG99 397 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 BIRC3Q13489 604 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 LPAL2Q16609 132 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 EDRF1Q3B7T1 1238 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 HSF5Q4G112 596 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 HECTD3Q5T447 861 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 KLHDC10Q6PID8 442 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 PRR23CQ6ZRP0 262 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 PRR23BQ6ZRT6 265 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 INTS8Q75QN2 995 aaKnown RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ACOT1Q86TX2 421 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ETFBKMTQ8IXQ9 262 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 RPLP0P6Q8NHW5 317 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 SPATA20Q8TB22 786 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 NETO1Q8TDF5 533 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ELMO3Q96BJ8 720 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 PNPLA8Q9NP80 782 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 CYLDQ9NQC7 956 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 CFAP97Q9P2B7 532 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 HMGXB4Q9UGU5 601 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 CHORDC1Q9UHD1 332 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC8A2Q9UPR5 921 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 FRMD4BQ9Y2L6 1034 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 PCDHGA5Q9Y5G8 931 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ATP6V1DQ9Y5K8 247 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 CPQQ9Y646 472 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 THADAQ6YHU6 1953 aa8.88□□□□□ -0.99
SMARCB1-207ENST00000491967 ATP8B3O60423 1300 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 ANTXRLA6NF34 631 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 AXIN1O15169 862 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 HOXC11O43248 304 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 CILPO75339 1184 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 APBB3O95704 486 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 NR2F2P24468 414 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 RPL13P26373 211 aaKnown RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 PSMC2P35998 433 aaKnown RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 TNFRSF4P43489 277 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC6A11P48066 632 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 PXNP49023 591 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 DMC1Q14565 340 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 PLK5Q496M5 336 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 SPOPLQ6IQ16 392 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 HTR3DQ70Z44 454 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 KBTBD6Q86V97 674 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 ZC3H3Q8IXZ2 948 aaKnown RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 FMR1NBQ8N0W7 255 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 C12orf29Q8N999 325 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms