RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 PRR23CQ6ZRP0 262 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 WDR5BQ86VZ2 330 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 BBS7Q8IWZ6 715 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CPA6Q8N4T0 437 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 RLN3Q8WXF3 142 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 FBXO32Q969P5 355 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 C8orf48Q96LL4 319 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 ARID3AQ99856 593 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 MAGEF1Q9HAY2 307 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 NMUR1Q9HB89 426 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 TRPM5Q9NZQ8 1165 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 UXTQ9UBK9 157 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-211ENST00000491581 GMEB2Q9UKD1 530 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CFAP45Q9UL16 551 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 THADAQ6YHU6 1953 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 NUP205Q92621 2012 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 TRIM49BA6NDI0 452 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 PATE3B3GLJ2 98 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 HHLA1C9JL84 531 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 SGK1O00141 431 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 TRIM66O15016 1216 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 CYP26A1O43174 497 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 RPP40O75818 363 aaKnown RBP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 NR2F2P24468 414 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 YWHAQP27348 245 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 TIE1P35590 1138 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 PMS1P54277 932 aaKnown RBP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 NRLP54845 237 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 DHCR24Q15392 516 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 LY6G5CQ5SRR4 150 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 KRBA2Q6ZNG9 492 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 MIB1Q86YT6 1006 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 ADGRG2Q8IZP9 1017 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 NUP93Q8N1F7 819 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 DEFB119Q8N690 84 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 ALLCQ8N6M5 410 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 SPATA18Q8TC71 538 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 GAB3Q8WWW8 586 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 NDRG1Q92597 394 aaKnown RBP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 TATDN2Q93075 761 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 BHMTQ93088 406 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-211ENST00000491581 MSANTD3Q96H12 275 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 ELOVL4Q9GZR5 314 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 CD93Q9NPY3 652 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 FSCN3Q9NQT6 498 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 RAB23Q9ULC3 237 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 SLC8A2Q9UPR5 921 aa9.45□□□□□ -0.9
HDAC3-211ENST00000491581 TULP2O00295 520 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 PDXKO00764 312 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ZNF202O95125 648 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ASS1P00966 412 aaKnown RBP9.44□□□□□ -0.9
HDAC3-211ENST00000491581 CCDC192P0DO97 292 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 VAMP7P51809 220 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 DGKEP52429 567 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 KRT85P78386 507 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 SLC7A9P82251 487 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ANO7Q6IWH7 933 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 CLEC20AQ6ZU45 233 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ARMCX6Q7L4S7 300 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 TMEM25Q86YD3 366 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 USP33Q8TEY7 942 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 CNTNAP3BQ96NU0 1288 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ACOX2Q99424 681 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-211ENST00000491581 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 DUSP15Q9H1R2 295 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-211ENST00000491581 SLC6A17Q9H1V8 727 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
HDAC3-211ENST00000491581 ABCA7Q8IZY2 2146 aa9.44□□□□□ -0.9
HDAC3-211ENST00000491581 SPAG17Q6Q759 2223 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 ATXN2Q99700 1313 aaKnown RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 FAM237AA0A1B0GTK4 181 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 A0A1W2PQH9 124 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 GREM1O60565 184 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 ADAM23O75077 832 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 RHOBTB3O94955 611 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 KIF20AO95235 890 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 KLF8O95600 359 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 RETP07949 1114 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 DRD1P21728 446 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 ATICP31939 592 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 PPP2R5DQ14738 602 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 MAPRE1Q15691 268 aaKnown RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 PLK5Q496M5 336 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms