RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 TRIM66O15016 1216 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC28A2O43868 658 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 SH3BP5O60239 455 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 KRT18P05783 430 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ADH5P11766 374 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ANP32AP39687 249 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ZNF131P52739 623 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 FAM193AP78312 1265 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ATP2C1P98194 919 aaPredicted RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 GAD2Q05329 585 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 CYP4F3Q08477 520 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 GAB4Q2WGN9 574 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 WDR45BQ5MNZ6 344 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 GLRX5Q86SX6 157 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 GPBP1Q86WP2 473 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 NAXDQ8IW45 347 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 RGL4Q8IZJ4 473 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 TOP6BLQ8N6T0 577 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 LRRC15Q8TF66 581 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 POMGNT1Q8WZA1 660 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 CALML4Q96GE6 196 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 IPO9Q96P70 1041 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 PNMA5Q96PV4 448 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ARID3AQ99856 593 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 REEP2Q9BRK0 252 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 GDAP2Q9NXN4 497 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 ITGA11Q9UKX5 1188 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 AGAP1Q9UPQ3 857 aa11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 MYO18AQ92614 2054 aaKnown RBP11.91□□□□□ -0.5
CLCNKA-206ENST00000491433 NPHP3-ACAD11A0A0J9YXS1 232 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 NDUFS2O75306 463 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 HOXB2P14652 356 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 POLR2BP30876 1174 aaKnown RBP11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 GRIK1P39086 918 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 MYO1EQ12965 1108 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 IL17AQ16552 155 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 PLEKHG6Q3KR16 790 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 TMEM119Q4V9L6 283 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 TAF1BQ53T94 588 aaPredicted RBP11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 ARSHQ5FYA8 562 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC39A4Q6P5W5 647 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 ADGRF2Q8IZF7 708 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 HVCN1Q96D96 273 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 AK8Q96MA6 479 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 PKMYT1Q99640 499 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 ST6GALNAC4Q9H4F1 302 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 CDH9Q9ULB4 789 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
CLCNKA-206ENST00000491433 PLXNB3Q9ULL4 1909 aa11.9□□□□□ -0.51
CLCNKA-206ENST00000491433 DOPEY2Q9Y3R5 2298 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 GABRDO14764 452 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ADAM23O75077 832 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 GJB3O75712 270 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ITGB3P05106 788 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 GABRG2P18507 467 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ACAT1P24752 427 aaKnown RBP11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 NTSR1P30989 418 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 SLC6A11P48066 632 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 RBP5P82980 135 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 TFAMQ00059 246 aaKnown RBP11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 KDSRQ06136 332 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 RHBDF2Q6PJF5 856 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 LRRC69Q6ZNQ3 347 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 GPR155Q7Z3F1 870 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ZNF419Q96HQ0 510 aaPredicted RBP11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 PLIN2Q99541 437 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 TTLL2Q9BWV7 592 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 FSCN3Q9NQT6 498 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 CALCOCO1Q9P1Z2 691 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 ANKMY1Q9P2S6 941 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 DEC1Q9P2X7 70 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 EXOC7Q9UPT5 735 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 NFE2L3Q9Y4A8 694 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 CPQQ9Y646 472 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 MYOFQ9NZM1 2061 aa11.89□□□□□ -0.51
CLCNKA-206ENST00000491433 PTPRBP23467 1997 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms