RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GMIPQ9P107 970 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 CFAP97Q9P2B7 532 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SLC9A3R1O14745 358 aaPredicted RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 SCAMP3O14828 347 aaKnown RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 CETN3O15182 167 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 COCHO43405 550 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 HRO43593 1189 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 STX10O60499 249 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 SMC2O95347 1197 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 FAM200BP0CF97 657 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 EPB41P11171 864 aaKnown RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 CD58P19256 250 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 ADORA2BP29275 332 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 HOXC13P31276 330 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 GTF2H1P32780 548 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 PXNP49023 591 aaPredicted RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 TUBP50607 506 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 MAP3K7CLP57077 242 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 FOXK2Q01167 660 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 INCA1Q0VD86 236 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 HECTD3Q5T447 861 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 KRT39Q6A163 491 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 CEP68Q76N32 757 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 ERMP1Q7Z2K6 904 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 C12orf29Q8N999 325 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 RPLP0P6Q8NHW5 317 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 CCDC26Q8TAB7 109 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 ACDQ96AP0 544 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 EEF2KMTQ96G04 330 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 SMOQ99835 787 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 NT5C1AQ9BXI3 368 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 DNAI2Q9GZS0 605 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 NACA2Q9H009 215 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 FBXO44Q9H4M3 255 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 CYP3A43Q9HB55 503 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 APOBEC3GQ9HC16 384 aaKnown RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 TMEM8AQ9HCN3 771 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 COMMD8Q9NX08 183 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 CHORDC1Q9UHD1 332 aaPredicted RBP8.75□□□□□ -1.01
LSM2-213ENST00000491421 USP18Q9UMW8 372 aa8.75□□□□□ -1.01
LSM2-213ENST00000491421 KIF26AQ9ULI4 1882 aaPredicted RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 DCHS1Q96JQ0 3298 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 E2F8A0AVK6 867 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 FAM92AA1XBS5 289 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 BEST1O76090 585 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ADH1CP00326 375 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 CYP17A1P05093 508 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 RETP07949 1114 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ZDHHC11BP0C7U3 371 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 OPRD1P41143 372 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 PRCPP42785 496 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 MXI1P50539 228 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 LMNB2Q03252 620 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 DHCR24Q15392 516 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ZNF658Q5TYW1 1059 aaPredicted RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 SNX30Q5VWJ9 437 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 CLEC20AQ6ZU45 233 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ADGRG2Q8IZP9 1017 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ZMIZ2Q8NF64 920 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 EZH1Q92800 747 aaPredicted RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 SMARCE1Q969G3 411 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 JAKMIP2Q96AA8 810 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 GSDMAQ96QA5 445 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 TWNKQ96RR1 684 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 HNRNPABQ99729 332 aaKnown RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 TSG101Q99816 390 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 CCSER2Q9H7U1 834 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 CSNK1G1Q9HCP0 422 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 POLR3BQ9NW08 1133 aaPredicted RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 IL37Q9NZH6 218 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 TBC1D14Q9P2M4 693 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 HOOK1Q9UJC3 728 aaKnown RBP8.74□□□□□ -1.01
LSM2-213ENST00000491421 SH3BP1Q9Y3L3 701 aa8.74□□□□□ -1.01
LSM2-213ENST00000491421 CCDC163A0A0D9SF12 145 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 PRR5-ARHGAP8B1AHC4 643 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 SLC16A3O15427 465 aaKnown RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 CYP26A1O43174 497 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 TLR5O60602 858 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 CILPO75339 1184 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 RPP40O75818 363 aaKnown RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 APBB3O95704 486 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 CCDC192P0DO97 292 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 IRF1P10914 325 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 ADH5P11766 374 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 SEC13P55735 322 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 MCCD1P59942 119 aaPredicted RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 ARHGAP8P85298 464 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 SPEM2Q0P670 501 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 DMC1Q14565 340 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 PUM1Q14671 1186 aaKnown RBP eCLIP8.73□□□□□ -1.01
LSM2-213ENST00000491421 RSPO4Q2I0M5 234 aaPredicted RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 GAB4Q2WGN9 574 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 ZNF394Q53GI3 561 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 DCAF17Q5H9S7 520 aaPredicted RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 TCERG1LQ5VWI1 586 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 RHBDF2Q6PJF5 856 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 SYT13Q7L8C5 426 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms