RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 C3orf20Q8ND61 904 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 GIPC2Q8TF65 315 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 MCRS1Q96EZ8 462 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 TRMT2BQ96GJ1 504 aaKnown RBP19.59■□□□□ 0.73
MCF2L-230ENST00000491028 PACSIN1Q9BY11 444 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 ULBP1Q9BZM6 244 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 THAP2Q9H0W7 228 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 CNOT8Q9UFF9 292 aaKnown RBP19.59■□□□□ 0.73
MCF2L-230ENST00000491028 SCINQ9Y6U3 715 aa19.59■□□□□ 0.73
MCF2L-230ENST00000491028 ZNF638Q14966 1978 aaKnown RBP19.59■□□□□ 0.73
MCF2L-230ENST00000491028 MYO7AQ13402 2215 aa19.58■□□□□ 0.73
MCF2L-230ENST00000491028 FAM170AA1A519 330 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 PIK3R2O00459 728 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 PAPLNO95428 1278 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 RRM1P23921 792 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 YWHAQP27348 245 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 DAOAP59103 153 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 OR6B2Q6IFH4 312 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 OLFML1Q6UWY5 402 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 FAM183BPQ6ZVS7 135 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 DNAAF5Q86Y56 855 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 SCAMP5Q8TAC9 235 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 GPR152Q8TDT2 470 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 MYRFLQ96LU7 910 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 SFXN1Q9H9B4 322 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 MRPL47Q9HD33 250 aaKnown RBP19.58■□□□□ 0.72
MCF2L-230ENST00000491028 ASNSD1Q9NWL6 643 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 UXTQ9UBK9 157 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-230ENST00000491028 SCML2Q9UQR0 700 aa19.58■□□□□ 0.72
MCF2L-230ENST00000491028 MYO9BQ13459 2157 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 SPDYE4A6NLX3 237 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 PJA2O43164 708 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 NCK2O43639 380 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 XYLBO75191 536 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 CYP1A2P05177 515 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 GLI1P08151 1106 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 MRPS5P82675 430 aaKnown RBP19.57■□□□□ 0.72
MCF2L-230ENST00000491028 SLC6A3Q01959 620 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 IFRD2Q12894 506 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-230ENST00000491028 TAF12Q16514 161 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 C2CD6Q53TS8 623 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 EFHC1Q5JVL4 640 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 FAM102AQ5T9C2 384 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-230ENST00000491028 PLEKHA7Q6IQ23 1121 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 DNAJC24Q6P3W2 148 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 SLC26A9Q7LBE3 791 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 SCUBE3Q8IX30 993 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 PDZD8Q8NEN9 1154 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 CMASQ8NFW8 434 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-230ENST00000491028 VN1R2Q8NFZ6 395 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 OVCA2Q8WZ82 227 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 ZNF512Q96ME7 567 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-230ENST00000491028 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 TRIM62Q9BVG3 475 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 IGFLR1Q9H665 355 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 PARVAQ9NVD7 372 aa19.57■□□□□ 0.72
MCF2L-230ENST00000491028 TCRBV5S1A1TA0A578 114 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 BTNL10A8MVZ5 291 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 GLP2RO95838 553 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 USP17L7P0C7H9 530 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 HMGA1P17096 107 aaKnown RBP19.56■□□□□ 0.72
MCF2L-230ENST00000491028 IGFBP4P22692 258 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 GTF2F1P35269 517 aaKnown RBP eCLIP19.56■□□□□ 0.72
MCF2L-230ENST00000491028 DEKP35659 375 aaKnown RBP19.56■□□□□ 0.72
MCF2L-230ENST00000491028 USP46P62068 366 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 MTMR3Q13615 1198 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 ZNF662Q6ZS27 426 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 DNAJB7Q7Z6W7 309 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-230ENST00000491028 RHOT2Q8IXI1 618 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 ARHGAP18Q8N392 663 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 STKLD1Q8NE28 680 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 RFFLQ8WZ73 363 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 FBXO32Q969P5 355 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 SLITRK1Q96PX8 696 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 SELENOOQ9BVL4 669 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 PRKD2Q9BZL6 878 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 TSGA10Q9BZW7 698 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 UVRAGQ9P2Y5 699 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 PYCARDQ9ULZ3 195 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 PPP2R2CQ9Y2T4 447 aa19.56■□□□□ 0.72
MCF2L-230ENST00000491028 A0A0A6YYK5 440 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-230ENST00000491028 GOLGA8SH3BPF8 625 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 ZSCAN12O43309 604 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 ATMINO43313 823 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-230ENST00000491028 RFPL2O75678 378 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 PSEN1P49768 467 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 KIF5AQ12840 1032 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 ADAM15Q13444 863 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 TCEAL1Q15170 157 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 ARCQ7LC44 396 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 LEMD2Q8NC56 503 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 CLEC4CQ8WTT0 213 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 GOLGA1Q92805 767 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 ARHGEF26Q96DR7 871 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 MYO1AQ9UBC5 1043 aa19.55■□□□□ 0.72
MCF2L-230ENST00000491028 MAGED2Q9UNF1 606 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-230ENST00000491028 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 CCL16O15467 120 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms