RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MOGSQ13724 837 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 FRA10AC1Q70Z53 315 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 RBM17Q96I25 401 aaKnown RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SH2D3AQ9BRG2 576 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 FRMD8P1Q9BZ68 369 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CDYLQ9Y232 598 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 E2F8A0AVK6 867 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 LIASO43766 372 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 APOA1P02647 267 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SERPINE1P05121 402 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 FAXCQ5TGI0 409 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CDR2LQ86X02 465 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 TAS1R2Q8TE23 839 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 DLG3Q92796 817 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 WRNIP1Q96S55 665 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 ILKAPQ9H0C8 392 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CCPG1Q9ULG6 757 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 F5H423 210 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 FGRP09769 529 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 KCNA4P22459 653 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 TTKP33981 857 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SLC18A1P54219 525 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 NCCRP1Q6ZVX7 275 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CDKL3Q8IVW4 592 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 GATA6Q92908 595 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 HSPBAP1Q96EW2 488 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 KRT82Q9NSB4 513 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 GDF11O95390 407 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 HSPA1AP0DMV8 641 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 HSPA1BP0DMV9 641 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 MYL4P12829 197 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ALAS1P13196 640 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ARL4AP40617 200 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 RAP1GDS1P52306 607 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TRAF2Q12933 501 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 NR1D2Q14995 579 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 FASTKD3Q14CZ7 662 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 HEATR6Q6AI08 1181 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 NUP93Q8N1F7 819 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TRPC4APQ8TEL6 797 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 C7orf43Q8WVR3 580 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 AGBL1Q96MI9 1066 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 DACH2Q96NX9 599 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 OSBPL6Q9BZF3 934 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TRNAU1APQ9NX07 287 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 DCDC2Q9UHG0 476 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 DYTNA2CJ06 578 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 PDLIM1O00151 329 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ZMPSTE24O75844 475 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 OR6B1O95007 311 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 WASHC5Q12768 1159 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 PDCD6IPQ8WUM4 868 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 MECRQ9BV79 373 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 RSAD1Q9HA92 442 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TCF7L2Q9NQB0 619 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 GNEQ9Y223 722 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ZSCAN9O15535 394 aaPredicted RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 HLA-DRAP01903 254 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 CRABP2P29373 138 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 PKNOX1P55347 436 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 FMO1Q01740 532 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 EVX2Q03828 476 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 DLG1Q12959 904 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 PDZD4Q76G19 769 aaPredicted RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 SNX32Q86XE0 403 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 FBXW8Q8N3Y1 598 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ALLCQ8N6M5 410 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 HESX1Q9UBX0 185 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 TMA7Q9Y2S6 64 aaKnown RBP11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
CRNKL1-204ENST00000490910 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 GM2AP17900 193 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 STX5Q13190 355 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 HPS6Q86YV9 775 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ADCY4Q8NFM4 1077 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 DQX1Q8TE96 717 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 UBAP1Q9NZ09 502 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 K7ERI5 159 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms