RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 JAM2P57087 298 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 CDK17Q00537 523 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 ROR1Q01973 937 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MRPL58Q14197 206 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MTF1Q14872 753 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 TEAD4Q15561 434 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 PABPC1LQ4VXU2 614 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SFMBT2Q5VUG0 894 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SLC8B1Q6J4K2 584 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 C16orf46Q6P387 395 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGEF19Q8IW93 802 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 EFCAB13Q8IY85 973 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 FBXL13Q8NEE6 735 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SYN2Q92777 582 aaPredicted RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MCRS1Q96EZ8 462 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 CHP1Q99653 195 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 RTP3Q9BQQ7 232 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 STK33Q9BYT3 514 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 GPR88Q9GZN0 384 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SAP130Q9H0E3 1048 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 PLEKHA5Q9HAU0 1116 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 ZNHIT6Q9NWK9 470 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 RAB20Q9NX57 234 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 TUBGCP4Q9UGJ1 667 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 EGFL7Q9UHF1 273 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 DNAJC12Q9UKB3 198 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MRPS23Q9Y3D9 190 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 DAAM1Q9Y4D1 1078 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MYO15AQ9UKN7 3530 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 CITO14578 2027 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 DENND4AQ7Z401 1863 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 KMT2EQ8IZD2 1858 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 PROB1E7EW31 1015 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 H7C4K7 107 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 PRRG1O14668 218 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF500O60304 480 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ICMTO60725 284 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 LRG1P02750 347 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 NFICP08651 508 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ATF2P15336 505 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 NOS2P35228 1153 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 PIK3CAP42336 1068 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 AP3M2P53677 418 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TFAMQ00059 246 aaKnown RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 BIRC3Q13489 604 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 RAPGEF1Q13905 1077 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 DRAP1Q14919 205 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ZBTB6Q15916 424 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ASIC2Q16515 512 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 DUOXA2Q1HG44 320 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 CTXN3Q4LDR2 81 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 SCARA3Q6AZY7 606 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TOGARAM2Q6ZUX3 1019 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 RTL10Q7L3V2 364 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 CCDC105Q8IYK2 499 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TCEAL8Q8IYN2 117 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 DTWD2Q8NBA8 298 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ING5Q8WYH8 240 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 KAT5Q92993 513 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 SUSD3Q96L08 255 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 KREMEN1Q96MU8 473 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 SPAG5Q96R06 1193 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 PI4K2AQ9BTU6 479 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 GRIP2Q9C0E4 1043 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 MTMR12Q9C0I1 747 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TBC1D17Q9HA65 648 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 UBE2TQ9NPD8 197 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 RRAGDQ9NQL2 400 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 SLC2A4RGQ9NR83 387 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 KCND1Q9NSA2 647 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 SPTLC3Q9NUV7 552 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 AIPL1Q9NZN9 384 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGAP20Q9P2F6 1191 aa8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TIMM13Q9Y5L4 95 aaPredicted RBP8.05□□□□□ -1.12
CLDN1-202ENST00000490800 TRIP11Q15643 1979 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ZFHX2Q9C0A1 2572 aaPredicted RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 MTCL1Q9Y4B5 1905 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGEF37A1IGU5 675 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 USP27XA6NNY8 438 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 F8VZ95 297 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 AXIN1O15169 862 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 PHACTR2O75167 634 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 TNNC2P02585 160 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SERPING1P05155 500 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 DCNP07585 359 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 RHOP08100 348 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 PLEKP08567 350 aaPredicted RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 POU2F2P09086 479 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 PNMA6AP0CW24 399 aaPredicted RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 CYP3A5P20815 502 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms