RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 MYCBPAPQ8TBZ2 947 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 DNAJC19Q96DA6 116 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 INTS13Q9NVM9 706 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 PTPRJQ12913 1337 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 ADAMTS20P59510 1910 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 FREM2Q5SZK8 3169 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 TBC1D3BA6NDS4 549 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 AP5Z1O43299 807 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 SERPINF2P08697 491 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 MDH1BQ5I0G3 518 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 LY6G5CQ5SRR4 150 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
VARS-227ENST00000489979 GPD1LQ8N335 351 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 MINDY1Q8N5J2 469 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 NAT16Q8N8M0 369 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 OR2I1PQ8NGU4 316 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 C8orf48Q96LL4 319 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 FGFBP2Q9BYJ0 223 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 CAPN10Q9HC96 672 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 TBC1D14Q9P2M4 693 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 STK17AQ9UEE5 414 aa14.88□□□□□ -0.03
VARS-227ENST00000489979 FAM221BA6H8Z2 402 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 TNNC2P02585 160 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 GABRG2P18507 467 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 CACNA2D1P54289 1103 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 GAD2Q05329 585 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 ZNF33AQ06730 810 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 IFRD2Q12894 506 aaPredicted RBP14.87□□□□□ -0.03
VARS-227ENST00000489979 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 SV2BQ7L1I2 683 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 HS2ST1Q7LGA3 356 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 DDX42Q86XP3 938 aaKnown RBP eCLIP14.87□□□□□ -0.03
VARS-227ENST00000489979 TMX3Q96JJ7 454 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 SLITRK1Q96PX8 696 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 MMS19Q96T76 1030 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 MRPL45Q9BRJ2 306 aaKnown RBP14.87□□□□□ -0.03
VARS-227ENST00000489979 CALCOCO1Q9P1Z2 691 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 CCDC39Q9UFE4 941 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
VARS-227ENST00000489979 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 ARHGAP33O14559 1287 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 PRPF6O94906 941 aaKnown RBP14.86□□□□□ -0.03
VARS-227ENST00000489979 CAPNS1P04632 268 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 NEFLP07196 543 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 CD59P13987 128 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 IDEP14735 1019 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 GNL1P36915 607 aaPredicted RBP14.86□□□□□ -0.03
VARS-227ENST00000489979 ALCAMQ13740 583 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 DUOXA2Q1HG44 320 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 ZNF423Q2M1K9 1284 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 RRAGBQ5VZM2 374 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 BTBD8Q5XKL5 378 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 TRMT11Q7Z4G4 463 aaKnown RBP14.86□□□□□ -0.03
VARS-227ENST00000489979 RABEPKQ7Z6M1 372 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
VARS-227ENST00000489979 PROSER1Q86XN7 944 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 ETFBKMTQ8IXQ9 262 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
VARS-227ENST00000489979 KCNV2Q8TDN2 545 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 SNX25Q9H3E2 840 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 OLFML3Q9NRN5 406 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 TMEM30AQ9NV96 361 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 HCN2Q9UL51 889 aa14.86□□□□□ -0.03
VARS-227ENST00000489979 IGHV1OR15-9A0A0B4J2B8 117 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 ZNF233A6NK53 670 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 TULP3O75386 442 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 SYPP08247 313 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 HOXB2P14652 356 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 YWHAQP27348 245 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 WASP42768 502 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 SCAPQ12770 1279 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 HNRNPDQ14103 355 aaKnown RBP14.85□□□□□ -0.03
VARS-227ENST00000489979 C10orf76Q5T2E6 689 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
VARS-227ENST00000489979 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 CBWD2Q8IUF1 395 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 SLC41A1Q8IVJ1 513 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 OR6B3Q8NGW1 331 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 OTUB2Q96DC9 234 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 ZFRQ96KR1 1074 aaKnown RBP14.85□□□□□ -0.03
VARS-227ENST00000489979 CAMK1GQ96NX5 476 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 ZNF518BQ9C0D4 1074 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 DPEP3Q9H4B8 488 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
VARS-227ENST00000489979 DEC1Q9P2X7 70 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 SH3BP1Q9Y3L3 701 aa14.85□□□□□ -0.03
VARS-227ENST00000489979 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 A0A1W2PQF6 199 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 FRMD3A2A2Y4 597 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 CLDN5O00501 218 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 TRIM24O15164 1050 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 HOXC11O43248 304 aaPredicted RBP14.84□□□□□ -0.03
VARS-227ENST00000489979 COCHO43405 550 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 SH3BP5O60239 455 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 TACC1O75410 805 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
VARS-227ENST00000489979 NTSR1P30989 418 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms