RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SGO2Q562F6 1265 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 TRIM68Q6AZZ1 485 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 RALGPS2Q86X27 583 aaPredicted RBP20.19■□□□□ 0.82
EPHB4-207ENST00000489808 TTC16Q8NEE8 873 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 IRF2BPLQ9H1B7 796 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 EBF3Q9H4W6 596 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 DUS2Q9NX74 493 aaKnown RBP20.19■□□□□ 0.82
EPHB4-207ENST00000489808 USP3Q9Y6I4 520 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
EPHB4-207ENST00000489808 SPECC1L-ADORA2AF8WAN1 911 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 H0Y858 1186 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 LEFTY2O00292 366 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 PAEPP09466 180 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 CD19P15391 556 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 TUBP50607 506 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 NHLH1Q02575 133 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 C1orf228Q6PIY5 440 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 TTC30AQ86WT1 665 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 FAM114A1Q8IWE2 563 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 KREMEN1Q96MU8 473 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 LINC00597Q9H2U6 94 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 TLR8Q9NR97 1041 aaKnown RBP20.18■□□□□ 0.82
EPHB4-207ENST00000489808 NDRG2Q9UN36 371 aaKnown RBP20.18■□□□□ 0.82
EPHB4-207ENST00000489808 CPQQ9Y646 472 aa20.18■□□□□ 0.82
EPHB4-207ENST00000489808 MBL2P11226 248 aaPredicted RBP20.17■□□□□ 0.82
EPHB4-207ENST00000489808 ARSAP15289 507 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 CTHP32929 405 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 PLA2G5P39877 138 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 MAGEA9P43362 315 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 RPS9P46781 194 aaKnown RBP20.17■□□□□ 0.82
EPHB4-207ENST00000489808 SLC8A3P57103 927 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 GBP6Q6ZN66 633 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 PIGZQ86VD9 579 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 KIAA1958Q8N8K9 716 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 ENOX1Q8TC92 643 aaKnown RBP20.17■□□□□ 0.82
EPHB4-207ENST00000489808 TFAP2BQ92481 460 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 CCSER2Q9H7U1 834 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 LMAN1LQ9HAT1 526 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 UBE2TQ9NPD8 197 aaPredicted RBP20.17■□□□□ 0.82
EPHB4-207ENST00000489808 SMPD4Q9NXE4 827 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 TSPAN16Q9UKR8 245 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 WNT6Q9Y6F9 365 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 MUC6Q6W4X9 2439 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 F5P12259 2224 aa20.17■□□□□ 0.82
EPHB4-207ENST00000489808 COL4A3Q01955 1670 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 GREB1Q4ZG55 1949 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 GTPBP10A4D1E9 387 aaKnown RBP20.16■□□□□ 0.82
EPHB4-207ENST00000489808 O00370 1275 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 CYP26A1O43174 497 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 SLC9A1P19634 815 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 IFNAR2P48551 515 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 PDE4CQ08493 712 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 CNGA2Q16280 664 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 MAN2A1Q16706 1144 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 GOLGA7BQ2TAP0 167 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 EML3Q32P44 896 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 RAB41Q5JT25 222 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 TXNDC11Q6PKC3 985 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 SASS6Q6UVJ0 657 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 LCLAT1Q6UWP7 414 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 C1orf210Q8IVY1 113 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 NMUR1Q9HB89 426 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 SAMSN1Q9NSI8 373 aaKnown RBP20.16■□□□□ 0.82
EPHB4-207ENST00000489808 OSER1Q9NX31 292 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 HESX1Q9UBX0 185 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 CNTN6Q9UQ52 1028 aa20.16■□□□□ 0.82
EPHB4-207ENST00000489808 A0A1W2PQH9 124 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 TLR5O60602 858 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 TBX18O95935 607 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 CHRNB1P11230 501 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 PON1P27169 355 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ZNF132P52740 706 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 BCAT1P54687 386 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ANGPT1Q15389 498 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 EXOC3L4Q17RC7 722 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 VWA3BQ502W6 1294 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 PKDCCQ504Y2 493 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 HSP90AA4PQ58FG1 418 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 TRIM65Q6PJ69 517 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ENOSF1Q7L5Y1 443 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 CCDC186Q7Z3E2 898 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 SCD5Q86SK9 330 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 DDX42Q86XP3 938 aaKnown RBP eCLIP20.15■□□□□ 0.82
EPHB4-207ENST00000489808 RBBP8NLQ8NC74 664 aaPredicted RBP20.15■□□□□ 0.82
EPHB4-207ENST00000489808 UBA3Q8TBC4 463 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ATOH1Q92858 354 aaPredicted RBP20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ZFRQ96KR1 1074 aaKnown RBP20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ZSWIM1Q9BR11 485 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 TUBGCP2Q9BSJ2 902 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 ECT2Q9H8V3 914 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 CYLDQ9NQC7 956 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 CFAP97Q9P2B7 532 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 KMT2EQ8IZD2 1858 aa20.15■□□□□ 0.82
EPHB4-207ENST00000489808 NUP210Q8TEM1 1887 aaPredicted RBP20.14■□□□□ 0.81
EPHB4-207ENST00000489808 TULP2O00295 520 aa20.14■□□□□ 0.81
EPHB4-207ENST00000489808 XPO1O14980 1071 aaKnown RBP20.14■□□□□ 0.81
EPHB4-207ENST00000489808 AMPD2Q01433 879 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms