RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	OLFM2	O95897	454 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	OAS1	P00973	400 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	PAEP	P09466	180 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	ZDHHC11B	P0C7U3	371 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	MBL2	P11226	248 aa	Predicted RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	VDR	P11473	427 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	CD19	P15391	556 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	TCF3	P15923	654 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	ACO1	P21399	889 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	TARS	P26639	723 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	PLA2G5	P39877	138 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	MAGEA9	P43362	315 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	AMPD2	Q01433	879 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	SGO2	Q562F6	1265 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	TMEM270	Q6UE05	265 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	RALGPS2	Q86X27	583 aa	Predicted RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	IRF2BP1	Q8IU81	584 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	UBR7	Q8N806	425 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	ANKRD52	Q8NB46	1076 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	RIN3	Q8TB24	985 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	FAM81B	Q96LP2	452 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	UBXN6	Q9BZV1	441 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	RNF38	Q9H0F5	515 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	INTS2	Q9H0H0	1204 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	EBF3	Q9H4W6	596 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	DUS2	Q9NX74	493 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	SMPD4	Q9NXE4	827 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	DLGAP2	Q9P1A6	1054 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	HESX1	Q9UBX0	185 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	NDRG2	Q9UN36	371 aa	Known RBP	11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	CPQ	Q9Y646	472 aa		11.7	□□□□□ -0.54
GGA1-222	ENST00000489772	SHISA7	A6NL88	538 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	HHLA1	C9JL84	531 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	SPECC1L-ADORA2A	F8WAN1	911 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772		H0Y858	1186 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	CTH	P32929	405 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	SOX9	P48436	509 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	IFNAR2	P48551	515 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	KIF11	P52732	1056 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	NHLH1	Q02575	133 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	USP4	Q13107	963 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	RUNX3	Q13761	415 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	GOLGA7B	Q2TAP0	167 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	TRIM68	Q6AZZ1	485 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	SASS6	Q6UVJ0	657 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	GBP6	Q6ZN66	633 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	RBM43	Q6ZSC3	357 aa	Known RBP	11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	ENOSF1	Q7L5Y1	443 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	GPRIN1	Q7Z2K8	1008 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	CPA6	Q8N4T0	437 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	KIAA1958	Q8N8K9	716 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	ATOH1	Q92858	354 aa	Predicted RBP	11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	KAT5	Q92993	513 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	ATP2A3	Q93084	1043 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	CLDN23	Q96B33	292 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	HPS4	Q9NQG7	708 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	TSPAN16	Q9UKR8	245 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	ZNF318	Q5VUA4	2279 aa		11.69	□□□□□ -0.54
GGA1-222	ENST00000489772	GTPBP10	A4D1E9	387 aa	Known RBP	11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	CYP26A1	O43174	497 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	COCH	O43405	550 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	RPS9	P46781	194 aa	Known RBP	11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	BCAT1	P54687	386 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	ZXDB	P98169	803 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	ANGPT1	Q15389	498 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	MAN2A1	Q16706	1144 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	CCDC183	Q5T5S1	534 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	TADA2B	Q86TJ2	420 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	PIGZ	Q86VD9	579 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	C1orf210	Q8IVY1	113 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	ARHGEF19	Q8IW93	802 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	ZNF687	Q8N1G0	1237 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	EXOC4	Q96A65	974 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	CRACR2A	Q9BSW2	395 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	CCSER2	Q9H7U1	834 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	CFAP97	Q9P2B7	532 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	WNT6	Q9Y6F9	365 aa		11.68	□□□□□ -0.54
GGA1-222	ENST00000489772	DMD	P11532	3685 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	OTOL1	A6NHN0	477 aa	Predicted RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	KCNJ18	B7U540	433 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772		O00370	1275 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	SLC9A3R1	O14745	358 aa	Predicted RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	XPO1	O14980	1071 aa	Known RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	TLR5	O60602	858 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	NFATC1	O95644	943 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	SETSIP	P0DME0	302 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	KRT5	P13647	590 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	PRKCSH	P14314	528 aa	Predicted RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	ARSA	P15289	507 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	ATP5C1	P36542	298 aa	Known RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	PSEN1	P49768	467 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	MFAP3	P55082	362 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	BST2	Q10589	180 aa	Known RBP	11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	NR1H3	Q13133	447 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	LRRC32	Q14392	662 aa		11.67	□□□□□ -0.54
GGA1-222	ENST00000489772	KCNJ12	Q14500	433 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms