RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 FAM167BQ9BTA0 163 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 KATNAL1Q9BW62 490 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 DHX36Q9H2U1 1008 aaKnown RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 SERHL2Q9H4I8 314 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 RIOX1Q9H6W3 641 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 XPNPEP3Q9NQH7 507 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 DKK4Q9UBT3 224 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 HESX1Q9UBX0 185 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 ZMYND8Q9ULU4 1186 aaPredicted RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 SPATA31A3Q5VYP0 1347 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 MARCH11A6NNE9 402 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 ZAR1LA6NP61 321 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 F5H697 171 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 EYA2O00167 538 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 DCLK1O15075 740 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 IRAK2O43187 625 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 ASNA1O43681 348 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 TRIAP1O43715 76 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 INMTO95050 263 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 EGR1P18146 543 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 BDNFP23560 247 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 AVPR1BP47901 424 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 CPT1AP50416 773 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 TOB1P50616 345 aaPredicted RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 VAV2P52735 878 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 PLA1AQ53H76 456 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 ARL6IP4Q66PJ3 421 aaKnown RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 TAF2Q6P1X5 1199 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 MICALCLQ6ZW33 695 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 MOGAT3Q86VF5 341 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 SUPT20HQ8NEM7 779 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 OR1N1Q8NGS0 311 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 OTUD7AQ8TE49 926 aaPredicted RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 USP13Q92995 863 aaPredicted RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 VOPP1Q96AW1 172 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 PPM1MQ96MI6 270 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 PPP1R9BQ96SB3 815 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 PRPF18Q99633 342 aaKnown RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 PCDHAC1Q9H158 963 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 INTS13Q9NVM9 706 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 TBCCD1Q9NVR7 557 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 ANKFY1Q9P2R3 1169 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 DKK2Q9UBU2 259 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 FBXO9Q9UK97 447 aaPredicted RBP5.01□□□□□ -1.61
XRN1-213ENST00000489241 COL4A3Q01955 1670 aa5.01□□□□□ -1.61
XRN1-213ENST00000489241 TRGV11A0A075B6L2 103 aa5□□□□□ -1.61
XRN1-213ENST00000489241 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
XRN1-213ENST00000489241 A0A0B4J269 797 aa5□□□□□ -1.61
XRN1-213ENST00000489241 CCP110O43303 1012 aa5□□□□□ -1.61
XRN1-213ENST00000489241 IDEP14735 1019 aa5□□□□□ -1.61
XRN1-213ENST00000489241 TPH1P17752 444 aa5□□□□□ -1.61
XRN1-213ENST00000489241 DDIT3P35638 169 aa5□□□□□ -1.61
XRN1-213ENST00000489241 NPTX2P47972 431 aa5□□□□□ -1.61
XRN1-213ENST00000489241 GCLCP48506 637 aaPredicted RBP5□□□□□ -1.61
XRN1-213ENST00000489241 PNLIPRP1P54315 467 aa5□□□□□ -1.61
XRN1-213ENST00000489241 TAF12Q16514 161 aa5□□□□□ -1.61
XRN1-213ENST00000489241 GEN1Q17RS7 908 aa5□□□□□ -1.61
XRN1-213ENST00000489241 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
XRN1-213ENST00000489241 EEF1AKMT2Q5JPI9 291 aaKnown RBP5□□□□□ -1.61
XRN1-213ENST00000489241 SFRP4Q6FHJ7 346 aaPredicted RBP5□□□□□ -1.61
XRN1-213ENST00000489241 KCTD20Q7Z5Y7 419 aa5□□□□□ -1.61
XRN1-213ENST00000489241 PCGF5Q86SE9 256 aa5□□□□□ -1.61
XRN1-213ENST00000489241 CCDC28AQ8IWP9 274 aa5□□□□□ -1.61
XRN1-213ENST00000489241 LCORLQ8N3X6 602 aa5□□□□□ -1.61
XRN1-213ENST00000489241 NAXEQ8NCW5 288 aa5□□□□□ -1.61
XRN1-213ENST00000489241 PPHLN1Q8NEY8 458 aaKnown RBP5□□□□□ -1.61
XRN1-213ENST00000489241 TMEM125Q96AQ2 219 aa5□□□□□ -1.61
XRN1-213ENST00000489241 NACC2Q96BF6 587 aa5□□□□□ -1.61
XRN1-213ENST00000489241 LRIG1Q96JA1 1093 aa5□□□□□ -1.61
XRN1-213ENST00000489241 SLC46A1Q96NT5 459 aa5□□□□□ -1.61
XRN1-213ENST00000489241 WDR11Q9BZH6 1224 aa5□□□□□ -1.61
XRN1-213ENST00000489241 TTYH3Q9C0H2 523 aa5□□□□□ -1.61
XRN1-213ENST00000489241 ZHX3Q9H4I2 956 aa5□□□□□ -1.61
XRN1-213ENST00000489241 UNKLQ9H9P5 680 aaKnown RBP5□□□□□ -1.61
XRN1-213ENST00000489241 MLXIPQ9HAP2 919 aa5□□□□□ -1.61
XRN1-213ENST00000489241 VPS45Q9NRW7 570 aa5□□□□□ -1.61
XRN1-213ENST00000489241 GGA3Q9NZ52 723 aa5□□□□□ -1.61
XRN1-213ENST00000489241 VSX1Q9NZR4 365 aaPredicted RBP5□□□□□ -1.61
XRN1-213ENST00000489241 TESQ9UGI8 421 aaKnown RBP5□□□□□ -1.61
XRN1-213ENST00000489241 SRP68Q9UHB9 627 aaKnown RBP5□□□□□ -1.61
XRN1-213ENST00000489241 SHOC2Q9UQ13 582 aa5□□□□□ -1.61
XRN1-213ENST00000489241 CRYL1Q9Y2S2 319 aa5□□□□□ -1.61
XRN1-213ENST00000489241 PCSK5Q92824 1860 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 UNC119BA6NIH7 251 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 B9A039 149 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 J3KRW8 73 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 EPB41L2O43491 1005 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 RRP9O43818 475 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 SPDEFO95238 335 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 CKMT1AP12532 417 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 PECAM1P16284 738 aaPredicted RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 NPPBP16860 134 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 LRPAP1P30533 357 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 ATICP31939 592 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 PTDSS1P48651 473 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms