RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GMIPQ9P107 970 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 CACNA1IQ9P0X4 2223 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 COL4A2P08572 1712 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 FAM92AA1XBS5 289 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 SPECC1L-ADORA2AF8WAN1 911 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 SLC9A3R1O14745 358 aaPredicted RBP15.07■□□□□ 0
BRCA1-218ENST00000489037 OAS1P00973 400 aaKnown RBP15.07■□□□□ 0
BRCA1-218ENST00000489037 PAEPP09466 180 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
BRCA1-218ENST00000489037 PLA2G5P39877 138 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 TUBP50607 506 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 GCNT1Q02742 428 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 USP4Q13107 963 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 STILQ15468 1287 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 ZNF77Q15935 545 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 MAN2A1Q16706 1144 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 SNX30Q5VWJ9 437 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 RRAGAQ7L523 313 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 ENOSF1Q7L5Y1 443 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 CPA6Q8N4T0 437 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 LMO3Q8TAP4 145 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 OSCP1Q8WVF1 389 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 ATOH1Q92858 354 aaPredicted RBP15.07■□□□□ 0
BRCA1-218ENST00000489037 ATP2A3Q93084 1043 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 FAM83CQ9BQN1 747 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 EBF3Q9H4W6 596 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 SCML2Q9UQR0 700 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 CPQQ9Y646 472 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 CACNA1HO95180 2353 aa15.07■□□□□ 0
BRCA1-218ENST00000489037 LEFTY2O00292 366 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 PES1O00541 588 aaKnown RBP15.06■□□□□ 0
BRCA1-218ENST00000489037 TARSP26639 723 aaKnown RBP15.06■□□□□ 0
BRCA1-218ENST00000489037 PSEN1P49768 467 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 KIF11P52732 1056 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 BCAT1P54687 386 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 MFAP3P55082 362 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 TNK2Q07912 1038 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 GOLGA8FQ08AF8 430 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 GOLGA8DPQ0D2H9 430 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 LRRC32Q14392 662 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 EXOC3L4Q17RC7 722 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 GOLGA7BQ2TAP0 167 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 CCDC183Q5T5S1 534 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 ARHGAP18Q8N392 663 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 KIAA1958Q8N8K9 716 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 MED15Q96RN5 788 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 CRACR2AQ9BSW2 395 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 RNF38Q9H0F5 515 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 UBE2TQ9NPD8 197 aaPredicted RBP15.06■□□□□ 0
BRCA1-218ENST00000489037 ANO10Q9NW15 660 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 SPATA6Q9NWH7 488 aaPredicted RBP15.06■□□□□ 0
BRCA1-218ENST00000489037 SMPD4Q9NXE4 827 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 TSPAN16Q9UKR8 245 aa15.06■□□□□ 0
BRCA1-218ENST00000489037 MTF2Q9Y483 593 aaPredicted RBP15.06■□□□□ 0
BRCA1-218ENST00000489037 GTPBP10A4D1E9 387 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 HHLA1C9JL84 531 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 H0Y858 1186 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 COCHO43405 550 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 TLR5O60602 858 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 NFATC1O95644 943 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 OLFM2O95897 454 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 TPM2P07951 284 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 ZDHHC11BP0C7U3 371 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 RALAP11233 206 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 KRT5P13647 590 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 CTHP32929 405 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 ATP5C1P36542 298 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 RPS9P46781 194 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 SOX9P48436 509 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 NHLH1Q02575 133 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 BST2Q10589 180 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 TCF15Q12870 199 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 ANGPT1Q15389 498 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 RBM43Q6ZSC3 357 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 GPRIN1Q7Z2K8 1008 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 PIGZQ86VD9 579 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 IRF2BP1Q8IU81 584 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 ARHGEF19Q8IW93 802 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 UBR7Q8N806 425 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 CLDN23Q96B33 292 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 CDK5RAP1Q96SZ6 601 aaKnown RBP15.05■□□□□ -0
BRCA1-218ENST00000489037 TUBGCP2Q9BSJ2 902 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 IER2Q9BTL4 223 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 CCSER2Q9H7U1 834 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 LMAN1LQ9HAT1 526 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 LRRC4Q9HBW1 653 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 SH3BP1Q9Y3L3 701 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 WNT6Q9Y6F9 365 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 ATG2BQ96BY7 2078 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 MYOFQ9NZM1 2061 aa15.05■□□□□ -0
BRCA1-218ENST00000489037 COL4A3Q01955 1670 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 KCNJ18B7U540 433 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 XPO1O14980 1071 aaKnown RBP15.04■□□□□ -0
BRCA1-218ENST00000489037 LAMTOR5O43504 91 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 SETSIPP0DME0 302 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 ARSAP15289 507 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms