RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 VN1R3Q9BXE9 311 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 ASIC5Q9NY37 505 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 TNFRSF18Q9Y5U5 241 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 A0A087WZ62 844 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 SPRY2O43597 315 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 EXOC3O60645 756 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 PMPCBO75439 489 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 A1BGP04217 495 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 CELA2AP08217 269 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 DLDP09622 509 aaKnown RBP4.46□□□□□ -1.7
RFC4-213ENST00000489028 IL1R2P27930 398 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 EPHA3P29320 983 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 NTSR1P30989 418 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 PRKAR1BP31321 381 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 RENBPP51606 427 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 HOXA4Q00056 320 aaPredicted RBP4.46□□□□□ -1.7
RFC4-213ENST00000489028 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 SLC10A2Q12908 348 aaPredicted RBP4.46□□□□□ -1.7
RFC4-213ENST00000489028 STK3Q13188 491 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 YAF2Q8IY57 180 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 TERB1Q8NA31 727 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 RITA1Q96K30 269 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 C8orf48Q96LL4 319 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 STRBPQ96SI9 672 aaKnown RBP4.46□□□□□ -1.7
RFC4-213ENST00000489028 MMS19Q96T76 1030 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 CIPCQ9C0C6 399 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 NUP62CLQ9H1M0 184 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 VPS51Q9UID3 782 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 FAM50BQ9Y247 325 aa4.46□□□□□ -1.7
RFC4-213ENST00000489028 TCRBV5S1A1TA0A578 114 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 DNAJC9-AS1A6NH13 148 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 PRRT4C9JH25 899 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 CES2O00748 559 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 APAF1O14727 1248 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 KPNA5O15131 536 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 FGAP02671 866 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 PARP1P09874 1014 aaKnown RBP4.45□□□□□ -1.7
RFC4-213ENST00000489028 TPH1P17752 444 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 ABCG1P45844 678 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 ALDH5A1P51649 535 aaPredicted RBP4.45□□□□□ -1.7
RFC4-213ENST00000489028 PGDP52209 483 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 DAG1Q14118 895 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 TBC1D25Q3MII6 688 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 KLHDC7AQ5VTJ3 777 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 BCDIN3DQ7Z5W3 292 aaKnown RBP4.45□□□□□ -1.7
RFC4-213ENST00000489028 TTC17Q96AE7 1141 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 DAZAP1Q96EP5 407 aaKnown RBP4.45□□□□□ -1.7
RFC4-213ENST00000489028 SNX18Q96RF0 628 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 SH2D3AQ9BRG2 576 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 UNKQ9C0B0 810 aaKnown RBP4.45□□□□□ -1.7
RFC4-213ENST00000489028 TBC1D23Q9NUY8 699 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 FLRT1Q9NZU1 646 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 AMFRQ9UKV5 643 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 CAPN11Q9UMQ6 739 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 USP22Q9UPT9 525 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 SNX13Q9Y5W8 968 aa4.45□□□□□ -1.7
RFC4-213ENST00000489028 RHPN2P1A8MT19 583 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 H7C1Q1 480 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 EXOC5O00471 708 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 ANXA2P07355 339 aaKnown RBP4.44□□□□□ -1.7
RFC4-213ENST00000489028 TSHRP16473 764 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 RPL17P18621 184 aaKnown RBP4.44□□□□□ -1.7
RFC4-213ENST00000489028 MPGP29372 298 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 MCM5P33992 734 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 DIO1P49895 249 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 GATMP50440 423 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 TUBA4AP68366 448 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 LMAN2Q12907 356 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 GRM1Q13255 1194 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 FHL3Q13643 280 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 COBLL1Q53SF7 1204 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 CEP78Q5JTW2 689 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 MANEALQ5VSG8 457 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 RRAGBQ5VZM2 374 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 MTHFD1LQ6UB35 978 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 PTCHD4Q6ZW05 846 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 LIX1LQ8IVB5 337 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 SIRT6Q8N6T7 355 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 VGLL2Q8N8G2 317 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 C11orf44Q8N8P7 122 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 PNLDC1Q8NA58 520 aaKnown RBP4.44□□□□□ -1.7
RFC4-213ENST00000489028 SELENOOQ9BVL4 669 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 SARGQ9BW04 601 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 INO80BQ9C086 356 aaPredicted RBP4.44□□□□□ -1.7
RFC4-213ENST00000489028 GJB4Q9NTQ9 266 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 ASAP1Q9ULH1 1129 aa4.44□□□□□ -1.7
RFC4-213ENST00000489028 AQP7P3A6NL99 342 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 PSMD9O00233 223 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 PMM2O15305 246 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 IL18RAPO95256 599 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 CYP2D6P10635 497 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 MYCLP12524 364 aaPredicted RBP4.43□□□□□ -1.7
RFC4-213ENST00000489028 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms