RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 YY1P25490 414 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 IL1R2P27930 398 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 LIPAP38571 399 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 CPT1AP50416 773 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 HNRNPMP52272 730 aaKnown RBP eCLIP5.21□□□□□ -1.58
ITGB1-214ENST00000488427 BCAT1P54687 386 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 DAG1Q14118 895 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 C3orf38Q5JPI3 329 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 TREML2Q5T2D2 321 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 TSTD2Q5T7W7 516 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 DEPDC1Q5TB30 811 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 CEP85Q6P2H3 762 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 KSR2Q6VAB6 950 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 PARS2Q7L3T8 475 aaKnown RBP5.21□□□□□ -1.58
ITGB1-214ENST00000488427 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 IZUMO1Q8IYV9 350 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 CCDC150Q8NCX0 1101 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 GPR150Q8NGU9 434 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 OR56A3Q8NH54 315 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 SOCS4Q8WXH5 440 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 RFKQ969G6 155 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 INO80BQ9C086 356 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-214ENST00000488427 CPNE5Q9HCH3 593 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 ALG13Q9NP73 1137 aaKnown RBP5.21□□□□□ -1.58
ITGB1-214ENST00000488427 TRIM36Q9NQ86 728 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 TFCP2L1Q9NZI6 479 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 ARHGEF12Q9NZN5 1544 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 AKNAQ7Z591 1439 aa5.21□□□□□ -1.58
ITGB1-214ENST00000488427 A1L4Q6 167 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 hCG_1984214I3L0E3 225 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SNX2O60749 519 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SRGAP2O75044 1071 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 PIAS2O75928 621 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 IL6RP08887 468 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-214ENST00000488427 CD38P28907 300 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 PTDSS1P48651 473 aaKnown RBP5.2□□□□□ -1.58
ITGB1-214ENST00000488427 EEFSECP57772 596 aaKnown RBP5.2□□□□□ -1.58
ITGB1-214ENST00000488427 USP17L6PQ6QN14 398 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 PTF1AQ7RTS3 328 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 RD3Q7Z3Z2 195 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 DPP9Q86TI2 863 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 ABRAQ8N0Z2 381 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 BOLLQ8N9W6 283 aaKnown RBP5.2□□□□□ -1.58
ITGB1-214ENST00000488427 ABHD11Q8NFV4 315 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 XAGE5Q8WWM1 108 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 MAML1Q92585 1016 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 GLG1Q92896 1179 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SARAFQ96BY9 339 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SNX22Q96L94 193 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 COLEC11Q9BWP8 271 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 TRIM5Q9C035 493 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 STARD7Q9NQZ5 370 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SEMA4GQ9NTN9 838 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 COL20A1Q9P218 1284 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 MRPS17Q9Y2R5 130 aaKnown RBP5.2□□□□□ -1.58
ITGB1-214ENST00000488427 SPATA31A6Q5VVP1 1343 aa5.2□□□□□ -1.58
ITGB1-214ENST00000488427 RAB27BO00194 218 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 MT-ND5P03915 603 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 PLA2G5P39877 138 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 TBX4P57082 545 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 COL10A1Q03692 680 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-214ENST00000488427 C4orf46Q504U0 113 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 UNC13DQ70J99 1090 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 SESTD1Q86VW0 696 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 PRIMA1Q86XR5 153 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 ZNF280BQ86YH2 543 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 CCDC33Q8N5R6 958 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 SIRT6Q8N6T7 355 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 TNIP3Q96KP6 325 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 HEYLQ9NQ87 328 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-214ENST00000488427 SNX15Q9NRS6 342 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 CORO2BQ9UQ03 480 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 FAM50BQ9Y247 325 aa5.19□□□□□ -1.58
ITGB1-214ENST00000488427 EFCAB5A4FU69 1503 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 ZFYVE16Q7Z3T8 1539 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 LRRC7Q96NW7 1537 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 TMEM233B4DJY2 109 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CD3EAPO15446 510 aaKnown RBP5.18□□□□□ -1.58
ITGB1-214ENST00000488427 RRP9O43818 475 aaKnown RBP5.18□□□□□ -1.58
ITGB1-214ENST00000488427 JTBO76095 146 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 TJP3O95049 919 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 FESP07332 822 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CSF1RP07333 972 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 DRD4P21917 467 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CYP2C18P33260 490 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CLCN2P51788 898 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
ITGB1-214ENST00000488427 ST3GAL2Q16842 350 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 FBXO42Q6P3S6 717 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 MAVSQ7Z434 540 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CAND1Q86VP6 1230 aaKnown RBP5.18□□□□□ -1.58
ITGB1-214ENST00000488427 ARHGEF25Q86VW2 580 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 KRT73Q86Y46 540 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 FANCBQ8NB91 859 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 R3HDM4Q96D70 268 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 CHST8Q9H2A9 424 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 SYNPO2LQ9H987 977 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 PTGFRNQ9P2B2 879 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms