RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RSAD1Q9HA92 442 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 ROPN1Q9HAT0 212 aaPredicted RBP14.38□□□□□ -0.11
COPS7B-221ENST00000488111 NCANO14594 1321 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 TRIP11Q15643 1979 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 PEX11AO75192 247 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 TUBP50607 506 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 CDH8P55286 799 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 MXRA7P84157 204 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 ZNF667Q5HYK9 610 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 DRAXINQ8NBI3 349 aaPredicted RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 SEPT8Q92599 483 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 NIF3L1Q9GZT8 377 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 GIT1Q9Y2X7 761 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 DDX3XO00571 662 aaKnown RBP eCLIP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 ENPP3O14638 875 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 SLCO1A2P46721 670 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 MGAT5Q09328 741 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 LRRC14Q15048 493 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 CLUL1Q15846 466 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 ZNF394Q53GI3 561 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 NUGGCQ68CJ6 796 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 VSTM1Q6UX27 236 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 PGBD4Q96DM1 585 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 FAM210AQ96ND0 272 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 PPP1R10Q96QC0 940 aaKnown RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 MTRF1LQ9UGC7 380 aaKnown RBP14.37□□□□□ -0.11
COPS7B-221ENST00000488111 PCDHB4Q9Y5E5 795 aa14.37□□□□□ -0.11
COPS7B-221ENST00000488111 TRIM43BA6NCK2 446 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 MAP3K13O43283 966 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 UPP2O95045 317 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 THP07101 528 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TPBGLP0DKB5 382 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 FGFR1P11362 822 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 RARGP13631 454 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ACADSP16219 412 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ACO1P21399 889 aaKnown RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ASPAP45381 313 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 CGB2Q6NT52 195 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TMEM270Q6UE05 265 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ENOSF1Q7L5Y1 443 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 VPS36Q86VN1 386 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ENDOVQ8N8Q3 282 aaKnown RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TRIM43Q96BQ3 446 aaPredicted RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 LRMDAQ9H2I8 198 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TXLNGQ9NUQ3 528 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TMEM120BA0PK00 339 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 EIF4E1BA6NMX2 242 aaKnown RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 SKIP12755 728 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ALDH3A1P30838 453 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 RPL21P46778 160 aaKnown RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 OLIG1Q8TAK6 271 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 SDCBP2Q9H190 292 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
COPS7B-221ENST00000488111 PCDHA3Q9Y5H8 950 aa14.36□□□□□ -0.11
COPS7B-221ENST00000488111 CASTOR2A6NHX0 329 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 XPOTO43592 962 aaKnown RBP14.35□□□□□ -0.11
COPS7B-221ENST00000488111 PHF2O75151 1096 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 ATICP31939 592 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 PCK1P35558 622 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 PEX5P50542 639 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 RAD23BP54727 409 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 GALCP54803 685 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 FAM189BP81408 668 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 UHMK1Q8TAS1 419 aaKnown RBP14.35□□□□□ -0.11
COPS7B-221ENST00000488111 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 ETNK1Q9HBU6 452 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 CISHQ9NSE2 258 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 SEPT11Q9NVA2 429 aaKnown RBP14.35□□□□□ -0.11
COPS7B-221ENST00000488111 WDR35Q9P2L0 1181 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
COPS7B-221ENST00000488111 PIRO00625 290 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 SPTLC1O15269 473 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 ATP5HO75947 161 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 ORC1Q13415 861 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 NOP9Q86U38 636 aaKnown RBP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 RFFLQ8WZ73 363 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 FAM81BQ96LP2 452 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 RUNDC3BQ96NL0 473 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 OSGEPQ9NPF4 335 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms