RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TBX3O15119 743 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 CYP19A1P11511 503 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 ATF7P17544 494 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 RAB27AP51159 221 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 PLCD1P51178 756 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 AGFG1P52594 562 aaKnown RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 PIN1Q13526 163 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 RUSC1-AS1Q66K80 236 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 CRELD2Q6UXH1 353 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 NPNTQ6UXI9 565 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 PTCHD4Q6ZW05 846 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 EPM2AIP1Q7L775 607 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 SPARTQ8N0X7 666 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 OSR1Q8TAX0 266 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 EBF3Q9H4W6 596 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 NMRK2Q9NPI5 230 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 TMEM184CQ9NVA4 438 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 DNMT3BQ9UBC3 853 aaKnown RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
SMC4-219ENST00000487747 CDY1Q9Y6F8 540 aa5.23□□□□□ -1.57
SMC4-219ENST00000487747 BTBD19C9JJ37 291 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 AGPSO00116 658 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 PSMD9O00233 223 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 TBC1D4O60343 1298 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 SRGAP2O75044 1071 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 HSPA6P17066 643 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 EN2P19622 333 aaPredicted RBP5.22□□□□□ -1.57
SMC4-219ENST00000487747 UQCRC1P31930 480 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 GHRHRQ02643 423 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 PIP4P1Q86T03 277 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 MICU3Q86XE3 530 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 LINC01465Q8N7H1 131 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 PIGOQ8TEQ8 1089 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 WDYHV1Q96HA8 205 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 VCPIP1Q96JH7 1222 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 AIFM3Q96NN9 605 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 B3GNT5Q9BYG0 378 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 TRIM5Q9C035 493 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 XPNPEP3Q9NQH7 507 aa5.22□□□□□ -1.57
SMC4-219ENST00000487747 H7C4K7 107 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 INSIG1O15503 277 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 TUSC2O75896 110 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 SNHG28P0DPA3 235 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 HGFP14210 728 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 CCKBRP32239 447 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 ITGA8P53708 1063 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 SUMO2P61956 95 aaKnown RBP5.21□□□□□ -1.58
SMC4-219ENST00000487747 ZNF91Q05481 1191 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 RAB32Q13637 225 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 ANO6Q4KMQ2 910 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 KLHL22Q53GT1 634 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 MRPL10Q7Z7H8 261 aaKnown RBP5.21□□□□□ -1.58
SMC4-219ENST00000487747 MAFAQ8NHW3 353 aaPredicted RBP5.21□□□□□ -1.58
SMC4-219ENST00000487747 SIGLEC11Q96RL6 698 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 BRINP2Q9C0B6 783 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 ZSCAN32Q9NX65 697 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 ZNF580Q9UK33 172 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 ASAP1Q9ULH1 1129 aa5.21□□□□□ -1.58
SMC4-219ENST00000487747 NOP58Q9Y2X3 529 aaKnown RBP5.21□□□□□ -1.58
SMC4-219ENST00000487747 PHGDHO43175 533 aaKnown RBP5.2□□□□□ -1.58
SMC4-219ENST00000487747 RASAL1O95294 804 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 CREB1P16220 341 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 SLC7A1P30825 629 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 PRKAR1BP31321 381 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 TIRAPP58753 221 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 HTRA4P83105 476 aaPredicted RBP5.2□□□□□ -1.58
SMC4-219ENST00000487747 RAPGEF1Q13905 1077 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 LARS2Q15031 903 aaKnown RBP5.2□□□□□ -1.58
SMC4-219ENST00000487747 TMTC4Q5T4D3 741 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 CACHD1Q5VU97 1274 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 TMEM65Q6PI78 240 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 ZDHHC17Q8IUH5 632 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 LIX1LQ8IVB5 337 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 VN1R3Q9BXE9 311 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 C22orf23Q9BZE7 217 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 ZNF518BQ9C0D4 1074 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 FOXP1Q9H334 677 aaPredicted RBP5.2□□□□□ -1.58
SMC4-219ENST00000487747 A1CFQ9NQ94 594 aaKnown RBP5.2□□□□□ -1.58
SMC4-219ENST00000487747 MGAT4CQ9UBM8 478 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 USP22Q9UPT9 525 aa5.2□□□□□ -1.58
SMC4-219ENST00000487747 TKTP29401 623 aaKnown RBP5.19□□□□□ -1.58
SMC4-219ENST00000487747 THBS4P35443 961 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 SUMO3P55854 103 aaPredicted RBP5.19□□□□□ -1.58
SMC4-219ENST00000487747 TIAL1Q01085 375 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMC4-219ENST00000487747 DEUP1Q05D60 604 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 LEXMQ3ZCV2 418 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 RANBP10Q6VN20 620 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 MAEAQ7L5Y9 396 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 LRP12Q9Y561 859 aa5.19□□□□□ -1.58
SMC4-219ENST00000487747 MYMKA6NI61 221 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 CD3EAPO15446 510 aaKnown RBP5.18□□□□□ -1.58
SMC4-219ENST00000487747 RGS10O43665 173 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 RRP9O43818 475 aaKnown RBP5.18□□□□□ -1.58
SMC4-219ENST00000487747 EPHA3P29320 983 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 MCM5P33992 734 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms