RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 OR5AN1Q8NGI8 311 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 ATP8B4Q8TF62 1192 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 KAT2BQ92831 832 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 GFM2Q969S9 779 aaKnown RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 DYNLL2Q96FJ2 89 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 LRRC37BQ96QE4 947 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 TEX13BQ9BXU2 312 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 USP44Q9H0E7 712 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 ZMAT4Q9H898 229 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 PIH1D3Q9NQM4 214 aaKnown RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 HOMER2Q9NSB8 354 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 H2AFY2Q9P0M6 372 aaPredicted RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 PUF60Q9UHX1 559 aaKnown RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 SYNPO2Q9UMS6 1093 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 LCTP09848 1927 aa5.15□□□□□ -1.58
CNN3-206ENST00000487539 NBEAQ8NFP9 2946 aa5.15□□□□□ -1.58
CNN3-206ENST00000487539 BPTFQ12830 3046 aa5.15□□□□□ -1.58
CNN3-206ENST00000487539 A0A087X1B8 175 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 WDR46O15213 610 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 NARSO43776 548 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 BAG3O95817 575 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 TOP3BO95985 862 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 DCNP07585 359 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 EEF2P13639 858 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 GLULP15104 373 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 LSP1P33241 339 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 SOX5P35711 763 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 STAT5BP51692 787 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 ADCY2Q08462 1091 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 NOLC1Q14978 699 aaKnown RBP eCLIP5.15□□□□□ -1.59
CNN3-206ENST00000487539 DHCR24Q15392 516 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 RNF151Q2KHN1 245 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 DUSP28Q4G0W2 176 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 SPECC1Q5M775 1068 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 KIAA1841Q6NSI8 718 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 GIMAP8Q8ND71 665 aaPredicted RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 CAGE1Q8TC20 777 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 USP7Q93009 1102 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 NEUROD6Q96NK8 337 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 BBC3Q96PG8 261 aaPredicted RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 CHMP4AQ9BY43 222 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 LMAN2LQ9H0V9 348 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 POMKQ9H5K3 350 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 NCDNQ9UBB6 729 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 USP18Q9UMW8 372 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 OAZ3Q9UMX2 235 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 ZFR2Q9UPR6 939 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 Q9Y3F1 56 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 USP9XQ93008 2570 aaPredicted RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 DSPP15924 2871 aaKnown RBP5.15□□□□□ -1.59
CNN3-206ENST00000487539 NAV1Q8NEY1 1877 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 ASXL3Q9C0F0 2248 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 CACNA1FO60840 1977 aa5.15□□□□□ -1.59
CNN3-206ENST00000487539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 PRR5-ARHGAP8B1AHC4 643 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 SLC30A4O14863 429 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 CIAO1O76071 339 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 PRPF6O94906 941 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 ZNF202O95125 648 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 APOL3O95236 402 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 FKBP9O95302 570 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 RB1P06400 928 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 CR2P20023 1033 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 TECP42680 631 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 SNAP25P60880 206 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 ARHGAP8P85298 464 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 ICA1Q05084 483 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 EXOSC9Q06265 439 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 MYBPC3Q14896 1274 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 HS1BP3Q53T59 392 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 ATF7IPQ6VMQ6 1270 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 ESPNLQ6ZVH7 1005 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 FKBP9P1Q75LS8 142 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 KANSL1Q7Z3B3 1105 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 TAX1BP1Q86VP1 789 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 THNSL2Q86YJ6 484 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 BCL6BQ8N143 479 aaPredicted RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 AMER2Q8N7J2 671 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 ZNF610Q8N9Z0 462 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 OR6J1Q8NGC5 347 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 CHAC2Q8WUX2 184 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 POF1BQ8WVV4 589 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 IL17RAQ96F46 866 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 HNRNPABQ99729 332 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 NOL10Q9BSC4 688 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 IFIH1Q9BYX4 1025 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 WDR11Q9BZH6 1224 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 C12orf65Q9H3J6 166 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 POFUT1Q9H488 388 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 TLE6Q9H808 572 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 CAAP1Q9H8G2 361 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 A1CFQ9NQ94 594 aaKnown RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 SPTLC3Q9NUV7 552 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 POLR3BQ9NW08 1133 aaPredicted RBP5.14□□□□□ -1.59
CNN3-206ENST00000487539 DLGAP2Q9P1A6 1054 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 HDAC6Q9UBN7 1215 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 COL4A3Q01955 1670 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 WDFY3Q8IZQ1 3526 aa5.14□□□□□ -1.59
CNN3-206ENST00000487539 KIAA1671Q9BY89 1806 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms