RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ZDHHC11BP0C7U3 371 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 CCDC130P13994 396 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 TUBP50607 506 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 ORC1Q13415 861 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 HECTD3Q5T447 861 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
CLIP2-206ENST00000487091 DCLK2Q8N568 766 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 C12orf29Q8N999 325 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 CD101Q93033 1021 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 TSG101Q99816 390 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 DNAI2Q9GZS0 605 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 FBXO44Q9H4M3 255 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 MMRN2Q9H8L6 949 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
CLIP2-206ENST00000487091 BEST1O76090 585 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 FAM200BP0CF97 657 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 MBL2P11226 248 aaPredicted RBP20.21■□□□□ 0.83
CLIP2-206ENST00000487091 FNTBP49356 437 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 MAP3K7CLP57077 242 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 FKBP3Q00688 224 aaKnown RBP20.21■□□□□ 0.83
CLIP2-206ENST00000487091 DMWDQ09019 674 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 ZC3H3Q8IXZ2 948 aaKnown RBP20.21■□□□□ 0.83
CLIP2-206ENST00000487091 KIAA2013Q8IYS2 634 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 ADGRG2Q8IZP9 1017 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 GPR161Q8N6U8 529 aaKnown RBP20.21■□□□□ 0.83
CLIP2-206ENST00000487091 CYFIP2Q96F07 1278 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 EEF2KMTQ96G04 330 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 TWNKQ96RR1 684 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.21■□□□□ 0.831e-7■■■■■ 115.4
CLIP2-206ENST00000487091 FAM49BQ9NUQ9 324 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 SMPD4Q9NXE4 827 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 RAB23Q9ULC3 237 aa20.21■□□□□ 0.83
CLIP2-206ENST00000487091 SLC16A3O15427 465 aaKnown RBP20.2■□□□□ 0.82
CLIP2-206ENST00000487091 COCHO43405 550 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 RNF40O75150 1001 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 CILPO75339 1184 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 MXI1P50539 228 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 NAIF1Q69YI7 327 aaPredicted RBP20.2■□□□□ 0.82
CLIP2-206ENST00000487091 PKN3Q6P5Z2 889 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 FILIP1Q7Z7B0 1213 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 FBXL13Q8NEE6 735 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 CCDC26Q8TAB7 109 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 WHAMMQ8TF30 809 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 SEMA4DQ92854 862 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 FAM124BQ9H5Z6 455 aaPredicted RBP20.2■□□□□ 0.82
CLIP2-206ENST00000487091 PNPLA8Q9NP80 782 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 RAB20Q9NX57 234 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 GMIPQ9P107 970 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 CFAP97Q9P2B7 532 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 TBC1D14Q9P2M4 693 aa20.2■□□□□ 0.82
CLIP2-206ENST00000487091 CCDC163A0A0D9SF12 145 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 HRO43593 1189 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 ID4P47928 161 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 LRRC63Q05C16 580 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 ANKRD40Q6AI12 368 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 ZFRQ96KR1 1074 aaKnown RBP20.19■□□□□ 0.82
CLIP2-206ENST00000487091 DUSP9Q99956 384 aaKnown RBP20.19■□□□□ 0.82
CLIP2-206ENST00000487091 TLR8Q9NR97 1041 aaKnown RBP20.19■□□□□ 0.82
CLIP2-206ENST00000487091 SLC8A2Q9UPR5 921 aa20.19■□□□□ 0.82
CLIP2-206ENST00000487091 CD58P19256 250 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 ADORA2BP29275 332 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 OPRD1P41143 372 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 SIM2Q14190 667 aaPredicted RBP20.18■□□□□ 0.82
CLIP2-206ENST00000487091 DHCR24Q15392 516 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 GAB4Q2WGN9 574 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 HEATR6Q6AI08 1181 aaKnown RBP20.18■□□□□ 0.82
CLIP2-206ENST00000487091 LAIR1Q6GTX8 287 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 CLEC20AQ6ZU45 233 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 CAMKK1Q8N5S9 505 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 EZH1Q92800 747 aaPredicted RBP20.18■□□□□ 0.82
CLIP2-206ENST00000487091 ERCC4Q92889 916 aaPredicted RBP20.18■□□□□ 0.82
CLIP2-206ENST00000487091 OTUB2Q96DC9 234 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 CCSER2Q9H7U1 834 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 GMEB2Q9UKD1 530 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 SCML2Q9UQR0 700 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 COQ4Q9Y3A0 265 aa20.18■□□□□ 0.82
CLIP2-206ENST00000487091 HHLA1C9JL84 531 aa20.17■□□□□ 0.82
CLIP2-206ENST00000487091 CYP17A1P05093 508 aa20.17■□□□□ 0.82
CLIP2-206ENST00000487091 PPP1R2P41236 205 aa20.17■□□□□ 0.82
CLIP2-206ENST00000487091 PMS1P54277 932 aaKnown RBP20.17■□□□□ 0.82
CLIP2-206ENST00000487091 STIM1Q13586 685 aa20.17■□□□□ 0.82
CLIP2-206ENST00000487091 MYOFQ9NZM1 2061 aa20.17■□□□□ 0.82
CLIP2-206ENST00000487091 PSMA7O14818 248 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 TLR5O60602 858 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 TCERG1LQ5VWI1 586 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 RHBDF2Q6PJF5 856 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 PRR23BQ6ZRT6 265 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 SYT13Q7L8C5 426 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 RPLP0P6Q8NHW5 317 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 ACDQ96AP0 544 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 DHTKD1Q96HY7 919 aaPredicted RBP20.16■□□□□ 0.82
CLIP2-206ENST00000487091 DUSP16Q9BY84 665 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 CISHQ9NSE2 258 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 ARMCX3Q9UH62 379 aaPredicted RBP20.16■□□□□ 0.82
CLIP2-206ENST00000487091 SH3BP1Q9Y3L3 701 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 DMXL1Q9Y485 3027 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms