RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PDK2Q15119 407 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 CDO1Q16878 200 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 ADGRD1Q6QNK2 874 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 OLFML1Q6UWY5 402 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 APBB1IPQ7Z5R6 666 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 TAB3Q8N5C8 712 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 MRRFQ96E11 262 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 MRPL45Q9BRJ2 306 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 SLC4A5Q9BY07 1137 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 PITPNM3Q9BZ71 974 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 A0A1W2PPM1 405 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 SMPD1P17405 629 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 RPA3P35244 121 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ACVR2BQ13705 512 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 KRT81Q14533 505 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 EFTUD2Q15029 972 aaKnown RBP eCLIP18.76■□□□□ 0.599e-7■■■■■ 31.7
PDLIM7-207ENST00000486828 BBS9Q3SYG4 887 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 DUSP28Q4G0W2 176 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 BOLA3Q53S33 107 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 RNF43Q68DV7 783 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 PMF1Q6P1K2 205 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 TTC30AQ86WT1 665 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 MAP7D3Q8IWC1 876 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 PARP9Q8IXQ6 854 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 PALM2Q8IXS6 379 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 FBF1Q8TES7 1133 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 TEKT4Q8WW24 435 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 USP6NLQ92738 828 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 SNX27Q96L92 541 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 MORF4L1Q9UBU8 362 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 GGT7Q9UJ14 662 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 RALGAPA2Q2PPJ7 1873 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 CFAP73A6NFT4 308 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 CA4P22748 312 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 HOXA11P31270 313 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 SLC6A3Q01959 620 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 PDK4Q16654 411 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 KIZQ2M2Z5 673 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 TMEM110Q86TL2 294 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ACOT1Q86TX2 421 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 CCDC63Q8NA47 563 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 PAFAH2Q99487 392 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 CXCL16Q9H2A7 254 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ADAMTS10Q9H324 1103 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 RXFP1Q9HBX9 757 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 SNTG2Q9NY99 539 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 KLHL14Q9P2G3 628 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 STARD13Q9Y3M8 1113 aa18.76■□□□□ 0.59
PDLIM7-207ENST00000486828 ATP2A2P16615 1042 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 MNAT1P51948 309 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 NRLP54845 237 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 ATP11AP98196 1134 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 KCNJ11Q14654 390 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 DGKDQ16760 1214 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 SLC27A1Q6PCB7 646 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 C1orf228Q6PIY5 440 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 FAM47EQ6ZV65 393 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 OR6J1Q8NGC5 347 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 ZMAT2Q96NC0 199 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 TBCBQ99426 244 aa18.75■□□□□ 0.59
PDLIM7-207ENST00000486828 BTBD19C9JJ37 291 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 H7C0C1 242 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 PPEF2O14830 753 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 TGM2P21980 687 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 IL4RP24394 825 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 SDC4P31431 198 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 ATP5OP48047 213 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 GCLCP48506 637 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 HUNKP57058 714 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 ELF3P78545 371 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 BNIP1Q12981 228 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 SLC1A5Q15758 541 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 SCYL2Q6P3W7 929 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 DPP9Q86TI2 863 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 VSIG1Q86XK7 387 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 LRRC52Q8N7C0 313 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 PLD5Q8N7P1 536 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 MZB1Q8WU39 189 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 FAM172AQ8WUF8 416 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 SLC35F5Q8WV83 523 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 KHSRPQ92945 711 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 MS4A4AQ96JQ5 239 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 USP29Q9HBJ7 922 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 NGRNQ9NPE2 291 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 FAM49BQ9NUQ9 324 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 HESX1Q9UBX0 185 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 GRID1Q9ULK0 1009 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 NME7Q9Y5B8 376 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 RRN3P2A6NIE6 340 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 APOL1O14791 398 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 CHADO15335 359 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 MGRN1O60291 552 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 ZWINTO95229 277 aa18.74■□□□□ 0.59
PDLIM7-207ENST00000486828 DESP17661 470 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms