RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KIAA1257Q9ULG3 409 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 DDX60Q8IY21 1712 aaKnown RBP13.76□□□□□ -0.21
HMGN1-216ENST00000486741 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 ICAM3P32942 547 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 TKTL1P51854 596 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 MORF4L2Q15014 288 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 DEFB106AQ8N104 65 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
HMGN1-216ENST00000486741 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 CCDC68Q9H2F9 335 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 DIAPH2O60879 1101 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 HSPA4LO95757 839 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 THP07101 528 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 SMIM10L2AP0DMW4 78 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 SMIM10L2BP0DMW5 78 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 TCF4P15884 667 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
HMGN1-216ENST00000486741 PPP1R26Q5T8A7 1209 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-216ENST00000486741 TRIM42Q8IWZ5 723 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 MREGQ8N565 214 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 NDRG1Q92597 394 aaKnown RBP13.76□□□□□ -0.21
HMGN1-216ENST00000486741 LPPQ93052 612 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
HMGN1-216ENST00000486741 GYG2O15488 501 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 LIASO43766 372 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TADA2AO75478 443 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 DCTN3O75935 186 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 PAEPP09466 180 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 ACADSBP45954 432 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 PSEN2P49810 448 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 PTK6Q13882 451 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CES3Q6UWW8 571 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TUBGCP4Q9UGJ1 667 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 SMG5Q9UPR3 1016 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CLDN5O00501 218 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CFLARO15519 480 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CNGA2Q16280 664 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 MON1BQ7L1V2 547 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 GBP7Q8N8V2 638 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CELF6Q96J87 481 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TSSK1BQ9BXA7 367 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 SENP1Q9P0U3 644 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 MYH15Q9Y2K3 1946 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 HAUS5O94927 633 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 ERBB2P04626 1255 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TAF5Q15542 800 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 CD302Q8IX05 232 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TFB1MQ8WVM0 346 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 ZNF669Q96BR6 464 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
HMGN1-216ENST00000486741 STXBP5LQ9Y2K9 1186 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
HMGN1-216ENST00000486741 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 MSCO60682 206 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 USP12O75317 370 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 GPC4O75487 556 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 CD48P09326 243 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 PCSK1P29120 753 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 PNPLA4P41247 253 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 COPS2P61201 443 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 FSCN1Q16658 493 aaKnown RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 WDR75Q8IWA0 830 aaKnown RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 ZC3H3Q8IXZ2 948 aaKnown RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 CNPY4Q8N129 248 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 IPMKQ8NFU5 416 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 A0A0G2JLL6 359 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 SLC8A1P32418 973 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 CPA2P48052 419 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 SKOR1P84550 965 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 KDSRQ06136 332 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 RPS6KA2Q15349 733 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 TAS1R3Q7RTX0 852 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 PRRT2Q7Z6L0 340 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-216ENST00000486741 MIB1Q86YT6 1006 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 MLH1P40692 756 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 CRADDP78560 199 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 KIF9Q9HAQ2 790 aa13.74□□□□□ -0.21
HMGN1-216ENST00000486741 ARHGEF37A1IGU5 675 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms