RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 FGF13Q92913 245 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 NAT10Q9H0A0 1025 aaKnown RBP13.69□□□□□ -0.22
SSR4-211ENST00000486204 ASAH2Q9NR71 780 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 AJAP1Q9UKB5 411 aaPredicted RBP13.69□□□□□ -0.22
SSR4-211ENST00000486204 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 SLC38A8A6NNN8 435 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 F8VP50 259 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 TADA3O75528 432 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 BEST1O76090 585 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 MICAL2O94851 1124 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CSH1P0DML2 217 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CSH2P0DML3 217 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 MYL4P12829 197 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 GJA1P17302 382 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 ZNF132P52740 706 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 PPP1R26Q5T8A7 1209 aaPredicted RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 MTSS1LQ765P7 747 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 TMEM150AQ86TG1 271 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 ING5Q8WYH8 240 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 TRMT2BQ96GJ1 504 aaKnown RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 SMARCD1Q96GM5 515 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 SPATA17Q96L03 361 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 C8orf48Q96LL4 319 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CEP295NLQ96MC4 621 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 HNRNPABQ99729 332 aaKnown RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 SMOQ99835 787 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 VPS16Q9H269 839 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CSNK1G1Q9HCP0 422 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 KRT82Q9NSB4 513 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 APEX2Q9UBZ4 518 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CDH7Q9ULB5 785 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
SSR4-211ENST00000486204 MRPS23Q9Y3D9 190 aaKnown RBP13.68□□□□□ -0.22
SSR4-211ENST00000486204 ATP8B3O60423 1300 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 A0A1W2PRU2 124 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 TRIM66O15016 1216 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 GRIK1P39086 918 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 USP46P62068 366 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
SSR4-211ENST00000486204 FZD5Q13467 585 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 ARHGAP17Q68EM7 881 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 CLEC20AQ6ZU45 233 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 JAKMIP2Q96AA8 810 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 CYFIP2Q96F07 1278 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 KCNK16Q96T55 309 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 MED10Q9BTT4 135 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
SSR4-211ENST00000486204 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
SSR4-211ENST00000486204 SOBPA7XYQ1 873 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 BECN2A8MW95 431 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 C1QTNF9BB2RNN3 333 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 HHLA1C9JL84 531 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 ZNF197O14709 1029 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
SSR4-211ENST00000486204 AP1G2O75843 785 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 F11P03951 625 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 C1QTNF9P0C862 333 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 TDGF1P13385 188 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 GABRR2P28476 465 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 ADORA2BP29275 332 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 SIM2Q14190 667 aaPredicted RBP13.66□□□□□ -0.22
SSR4-211ENST00000486204 TEAD2Q15562 447 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 STXBP5Q5T5C0 1151 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 TMEM270Q6UE05 265 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 RBBP8NLQ8NC74 664 aaPredicted RBP13.66□□□□□ -0.22
SSR4-211ENST00000486204 SHC3Q92529 594 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 TTLL2Q9BWV7 592 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
SSR4-211ENST00000486204 MRPS17Q9Y2R5 130 aaKnown RBP13.66□□□□□ -0.22
SSR4-211ENST00000486204 PCDHB4Q9Y5E5 795 aa13.66□□□□□ -0.22
SSR4-211ENST00000486204 NCANO14594 1321 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 O00370 1275 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 FGF19O95750 216 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 CALCAP01258 141 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 PAEPP09466 180 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 FCARP24071 287 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 ANXA13P27216 316 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 CYP4F8P98187 520 aa13.65□□□□□ -0.22
SSR4-211ENST00000486204 UNQ6494/PRO21346Q6UXR6 183 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms