RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 TDGQ13569 410 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 GRM2Q14416 872 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PASD1Q8IV76 773 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ARID3BQ8IVW6 561 aaPredicted RBP12.48□□□□□ -0.41
HPS4-214ENST00000485842 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 SLC44A3Q8N4M1 653 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
HPS4-214ENST00000485842 OVCA2Q8WZ82 227 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 RSPRY1Q96DX4 576 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 SLC22A12Q96S37 553 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 CYP2S1Q96SQ9 504 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PLA2G2FQ9BZM2 168 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PDCL3Q9H2J4 239 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 IL37Q9NZH6 218 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ZMYM5Q9UJ78 669 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 SCML2Q9UQR0 700 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 DAAM1Q9Y4D1 1078 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 NCANO14594 1321 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 A0A1W2PQC6 194 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 A0A1W2PQH9 124 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 FAM92AA1XBS5 289 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 ECI2O75521 394 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 USP17L7P0C7H9 530 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 CYP11B1P15538 503 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 KRT9P35527 623 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 SOX5P35711 763 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 STAT1P42224 750 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 PGFP49763 221 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 JAM2P57087 298 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 NR1I3Q14994 352 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 RAB41Q5JT25 222 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 VITQ6UXI7 678 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
HPS4-214ENST00000485842 ELSPBP1Q96BH3 223 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 CCSER2Q9H7U1 834 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 NMUR1Q9HB89 426 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 TRPV4Q9HBA0 871 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
HPS4-214ENST00000485842 NAGPAQ9UK23 515 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 CCL26Q9Y258 94 aa12.47□□□□□ -0.41
HPS4-214ENST00000485842 FAM170AA1A519 330 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 SOBPA7XYQ1 873 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 ZBED1O96006 694 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 OAS1P00973 400 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 MBL2P11226 248 aaPredicted RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 ALADP13716 330 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 HDCP19113 662 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 GPD2P43304 727 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 ZXDAP98168 799 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 ARID5AQ03989 594 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 MEA1Q16626 185 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 HECTD3Q5T447 861 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 YAF2Q8IY57 180 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 CELF5Q8N6W0 485 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 SLC35F5Q8WV83 523 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 KCTD13Q8WZ19 329 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 NDRG1Q92597 394 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 E2F7Q96AV8 911 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 XPO4Q9C0E2 1151 aaKnown RBP12.46□□□□□ -0.41
HPS4-214ENST00000485842 NACA2Q9H009 215 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 TDP1Q9NUW8 608 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 PCDHGC3Q9UN70 934 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 DUSP12Q9UNI6 340 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 USP3Q9Y6I4 520 aa12.46□□□□□ -0.41
HPS4-214ENST00000485842 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
HPS4-214ENST00000485842 COCHO43405 550 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 CBFA2T2O43439 604 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 TLR5O60602 858 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 TPM3P06753 285 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 ZDHHC11BP0C7U3 371 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 SRFP11831 508 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 RARGP13631 454 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 PSMC3P17980 439 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 GDI1P31150 447 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 PDCLQ13371 301 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 SCD5Q86SK9 330 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 MFSD6LQ8IWD5 586 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 SLC20A1Q8WUM9 679 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 DEPDC1BQ8WUY9 529 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 HSFY1Q96LI6 401 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
HPS4-214ENST00000485842 MIS12Q9H081 205 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
HPS4-214ENST00000485842 EPHX3Q9H6B9 360 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms