RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PREPLQ4J6C6 727 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-227ENST00000485102 MDH1BQ5I0G3 518 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 ETFBKMTQ8IXQ9 262 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 NUP93Q8N1F7 819 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 ALLCQ8N6M5 410 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 PIGKQ92643 395 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 SPACA7Q96KW9 195 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 NUSAP1Q9BXS6 441 aaKnown RBP13.85□□□□□ -0.19
HDAC6-227ENST00000485102 ADAM33Q9BZ11 813 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 SNX25Q9H3E2 840 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 VRTNQ9H8Y1 702 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 ARHGEF4Q9NR80 690 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 COMMD8Q9NX08 183 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 PKD1L2Q7Z442 2459 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 TULP1O00294 542 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 HOXC11O43248 304 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 TGFB1I1O43294 461 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 KLF8O95600 359 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 ADH5P11766 374 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 SYT1P21579 422 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 YWHAQP27348 245 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 ATICP31939 592 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 CACNA2D1P54289 1103 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 GAD2Q05329 585 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 E2F4Q16254 413 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 WDR72Q3MJ13 1102 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 EMC10Q5UCC4 262 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 B3GALNT2Q8NCR0 500 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 OR6B3Q8NGW1 331 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 GATA6Q92908 595 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 TMEM74BQ9NUR3 256 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 MBD1Q9UIS9 605 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-227ENST00000485102 PILRBQ9UKJ0 227 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 ZMIZ1Q9ULJ6 1067 aa13.84□□□□□ -0.19
HDAC6-227ENST00000485102 MAP3K13O43283 966 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 MBL2P11226 248 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 TNNI1P19237 187 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 TIE1P35590 1138 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 PTGER3P43115 390 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 TNNC1P63316 161 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 AMPD3Q01432 767 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 FOXC1Q12948 553 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 SEMA3BQ13214 749 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 HECTD3Q5T447 861 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 PIP4P1Q86T03 277 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 SFTPA1Q8IWL2 248 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 CEP76Q8TAP6 659 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 RLN3Q8WXF3 142 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 SCNM1Q9BWG6 230 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 B3GNT5Q9BYG0 378 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 SLC32A1Q9H598 525 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 SMPD4Q9NXE4 827 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 CGNQ9P2M7 1197 aaKnown RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 UBE4BO95155 1302 aa13.83□□□□□ -0.2
HDAC6-227ENST00000485102 FASNP49327 2511 aaKnown RBP13.83□□□□□ -0.2
HDAC6-227ENST00000485102 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 FAM221BA6H8Z2 402 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 A8MXQ7 604 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 COCHO43405 550 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 TULP3O75386 442 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 ABL1P00519 1130 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 DLATP10515 647 aaKnown RBP13.82□□□□□ -0.2
HDAC6-227ENST00000485102 ENGP17813 658 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
HDAC6-227ENST00000485102 EHHADHQ08426 723 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 LYSMD4Q5XG99 296 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 SLC36A4Q6YBV0 504 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 PAQR9Q6ZVX9 377 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 RABEPKQ7Z6M1 372 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 TMEFF1Q8IYR6 380 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 PDILTQ8N807 584 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 FRMD1Q8N878 549 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms