RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ADCY1Q08828 1119 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 CUL2Q13617 745 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RAB33AQ14088 237 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 MRPL58Q14197 206 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 SGSM1Q2NKQ1 1148 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 CFAP221Q4G0U5 840 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 ATAT1Q5SQI0 421 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 C6orf132Q5T0Z8 1188 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 WSCD1Q658N2 575 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 SLC8B1Q6J4K2 584 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF280DQ6N043 979 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TRIM72Q6ZMU5 477 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 ANKS3Q6ZW76 656 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RSRC2Q7L4I2 434 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 PEX26Q7Z412 305 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 OSTM1Q86WC4 334 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TDRD5Q8NAT2 981 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 GPR152Q8TDT2 470 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 EPS8L1Q8TE68 723 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RFFLQ8WZ73 363 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF516Q92618 1163 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 KAT5Q92993 513 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TATDN2Q93075 761 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TCEAL4Q96EI5 215 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TRIM11Q96F44 468 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 CAPZA3Q96KX2 299 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RIPOR3Q96MK2 946 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 OSBPL9Q96SU4 736 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 LPIN3Q9BQK8 851 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 SYT11Q9BT88 431 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 PI4K2AQ9BTU6 479 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RPP25Q9BUL9 199 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RHOBTB2Q9BYZ6 727 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TMLHEQ9NVH6 421 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 DNMT3BQ9UBC3 853 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 AMFRQ9UKV5 643 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 NENFQ9UMX5 172 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 SLC27A5Q9Y2P5 690 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 NME7Q9Y5B8 376 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 PTPRDP23468 1912 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 NCANO14594 1321 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 VPS13AQ96RL7 3174 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 KIF26AQ9ULI4 1882 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 GRID2IPA4D2P6 1211 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 MTMR11A4FU01 709 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PI4K2BG5E9Z4 385 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CES2O00748 559 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CYB561D2O14569 222 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PRRG1O14668 218 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SYN3O14994 580 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TRAPPC3O43617 180 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SRGAP2O75044 1071 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 ERLIN1O75477 346 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 FTLP02792 175 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 P4HA1P13674 534 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CEBPBP17676 345 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CCR2P41597 374 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TAF6P49848 677 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TWF1Q12792 350 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 NAA30Q147X3 362 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SLC39A12Q504Y0 691 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 STXBP5Q5T5C0 1151 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SDHAF4Q5VUM1 108 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TAF3Q5VWG9 929 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 OVOS1Q6IE37 1185 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TMCO3Q6UWJ1 677 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 DAAM2Q86T65 1068 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 NOP9Q86U38 636 aaKnown RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 LRRTM3Q86VH5 581 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SLC47A2Q86VL8 602 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 NT5DC4Q86YG4 428 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CD302Q8IX05 232 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 ATAD1Q8NBU5 361 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TPCN2Q8NHX9 752 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SLC20A1Q8WUM9 679 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 FAXDC2Q96IV6 333 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PBKQ96KB5 322 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 ISCUQ9H1K1 167 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 ASB7Q9H672 318 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 WDR6Q9NNW5 1121 aaKnown RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 CTTNBP2NLQ9P2B4 639 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 STK39Q9UEW8 545 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 SALL4Q9UJQ4 1053 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 NOCTQ9UK39 431 aaKnown RBP7.32□□□□□ -1.24
BRCA1-216ENST00000484087 L1RE1Q9UN81 338 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 C2CD2Q9Y426 696 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 YIPF1Q9Y548 306 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 PCDHB4Q9Y5E5 795 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 INSL5Q9Y5Q6 135 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 BACE2Q9Y5Z0 518 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 DENND4CQ5VZ89 1909 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 TICRRQ7Z2Z1 1910 aa7.32□□□□□ -1.24
BRCA1-216ENST00000484087 KPNA7A9QM74 516 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 XPOTO43592 962 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms