RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PRB1P04280 392 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 KRT18P05783 430 aaKnown RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 PFKLP17858 780 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 NDUFV2P19404 249 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 MAOBP27338 520 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 PCSK1P29120 753 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 GRIK1P39086 918 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 LHX1P48742 406 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 POU5F1Q01860 360 aaKnown RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 KCNA1Q09470 495 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 GRIK2Q13002 908 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 C10orf76Q5T2E6 689 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 C4orf50Q6ZRC1 276 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 ETFBKMTQ8IXQ9 262 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 TOP6BLQ8N6T0 577 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 KIAA1958Q8N8K9 716 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 SAAL1Q96ER3 474 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 SYT15Q9BQS2 421 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 PCOLCE2Q9UKZ9 415 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 APOBEC2Q9Y235 224 aaKnown RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 ASXL3Q9C0F0 2248 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 F8VP50 259 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 TBCAO75347 108 aaKnown RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 KRT19P08727 400 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 MBL2P11226 248 aaPredicted RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 NTSR1P30989 418 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 CACNA2D1P54289 1103 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 CYP27A1Q02318 531 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 TAF10Q12962 218 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 EGFLAMQ63HQ2 1017 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 GLRX5Q86SX6 157 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 BRSK2Q8IWQ3 736 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 RGL4Q8IZJ4 473 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 GLIS3Q8NEA6 775 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 WBP2Q969T9 261 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 ZNF419Q96HQ0 510 aaPredicted RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 ZFRQ96KR1 1074 aaKnown RBP11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 ST6GALNAC4Q9H4F1 302 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 IL21RQ9HBE5 538 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 CACNA2D2Q9NY47 1150 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 NME7Q9Y5B8 376 aa11.6□□□□□ -0.55
SMARCC1-205ENST00000483847 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 PPP1R37O75864 691 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 ATXN1LP0C7T5 689 aaKnown RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 ANXA13P27216 316 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 NOP14P78316 857 aaKnown RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 GAD2Q05329 585 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 IFRD2Q12894 506 aaPredicted RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TMPRSS7Q7RTY8 843 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 ZNF720Q7Z2F6 126 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TRMT11Q7Z4G4 463 aaKnown RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 LIMS2Q7Z4I7 341 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 SFR1Q86XK3 245 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TMEM25Q86YD3 366 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 BBS7Q8IWZ6 715 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TERB1Q8NA31 727 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 SETD7Q8WTS6 366 aaKnown RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 RAD54LQ92698 747 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 PCED1BQ96HM7 432 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 FAM124BQ9H5Z6 455 aaPredicted RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TOR4AQ9NXH8 423 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 TBC1D14Q9P2M4 693 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 DEC1Q9P2X7 70 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 CDH9Q9ULB4 789 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 PTPRJQ12913 1337 aa11.59□□□□□ -0.55
SMARCC1-205ENST00000483847 E2F8A0AVK6 867 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 HOXC11O43248 304 aaPredicted RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 COCHO43405 550 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ZNF217O75362 1048 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 C1QL1O75973 258 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ABCD1P33897 745 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 DDIT3P35638 169 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 RBP5P82980 135 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 BNC1Q01954 994 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 GRIN1Q05586 938 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 POSTNQ15063 836 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ANO4Q32M45 955 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms