RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 PRR25Q96S07 402 aa4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 TRIM5Q9C035 493 aa4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 VPS16Q9H269 839 aa4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 ATP6V0A4Q9HBG4 840 aa4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 GBA2Q9HCG7 927 aaPredicted RBP4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 RGS17Q9UGC6 210 aaPredicted RBP4.48□□□□□ -1.69
NSMCE4A-210ENST00000483541 CFAP69A5D8W1 941 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 PMPCBO75439 489 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 PARNO95453 639 aaKnown RBP4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 SLC7A1P30825 629 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 GKP32189 559 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 PLCD1P51178 756 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 GBX1Q14549 363 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 FAM187BQ17R55 369 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 INSCQ1MX18 579 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 PPP4R4Q6NUP7 873 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 CCDC149Q6ZUS6 474 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 IL31RAQ8NI17 732 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 ZBTB9Q96C00 473 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 HMCESQ96FZ2 354 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 FAM118BQ9BPY3 351 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 C22orf23Q9BZE7 217 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 OBP2AQ9NY56 170 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 ELOVL5Q9NYP7 299 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 L1RE1Q9UN81 338 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 USP22Q9UPT9 525 aa4.47□□□□□ -1.69
NSMCE4A-210ENST00000483541 FRMPD2Q68DX3 1309 aaPredicted RBP4.46□□□□□ -1.69
NSMCE4A-210ENST00000483541 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 TPP1O14773 563 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 FRS3O43559 492 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 A1BGP04217 495 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 FPR3P25089 353 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 IL1R2P27930 398 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 EPHA3P29320 983 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 NR4A2P43354 598 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 RGS19P49795 217 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 CACNB3P54284 484 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 MEX3CQ5U5Q3 659 aaKnown RBP4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 DENND2CQ68D51 928 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 APOA5Q6Q788 366 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 PTCHD4Q6ZW05 846 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 SRGAP1Q7Z6B7 1085 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 CNGA4Q8IV77 575 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 MPP5Q8N3R9 675 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 FAM156AQ8NDB6 213 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 RAPGEF4Q8WZA2 1011 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 CCDC17Q96LX7 622 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 PPP1R9BQ96SB3 815 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 TRIM36Q9NQ86 728 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 PDGFCQ9NRA1 345 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 GAR1Q9NY12 217 aaKnown RBP4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 CHPF2Q9P2E5 772 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 SCAF8Q9UPN6 1271 aaKnown RBP4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 DRG1Q9Y295 367 aaKnown RBP4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 CDY1Q9Y6F8 540 aa4.46□□□□□ -1.7
NSMCE4A-210ENST00000483541 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TMEM232C9JQI7 657 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 E5RJQ4 531 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 FCHO1O14526 889 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TBX3O15119 743 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 CCP110O43303 1012 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 VNN1O95497 513 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 ZBED1O96006 694 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 MT-CO3P00414 261 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 ATP5F1P24539 256 aaPredicted RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 ARHGAP25P42331 645 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 ALDH5A1P51649 535 aaPredicted RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TWIST1Q15672 202 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 PTCHD3Q3KNS1 767 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 RNF220Q5VTB9 566 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 DCAF12L1Q5VU92 463 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 MRPL10Q7Z7H8 261 aaKnown RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TMEM171Q8WVE6 324 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 CTHRC1Q96CG8 243 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 DHX36Q9H2U1 1008 aaKnown RBP4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TPCN1Q9ULQ1 816 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 USP19O94966 1318 aa4.45□□□□□ -1.7
NSMCE4A-210ENST00000483541 TRIM43BA6NCK2 446 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 MBD3L4A6NDZ8 208 aaPredicted RBP4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 MBD3L3A6NE82 208 aaPredicted RBP4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 CES2O00748 559 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 DSCR3O14972 297 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 GCATO75600 419 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 BRAFP15056 766 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 UQCRC1P31930 480 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 SUMO3P55854 103 aaPredicted RBP4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 TIRAPP58753 221 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 FAM193AP78312 1265 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 PSG6Q00889 435 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 KIAA0753Q2KHM9 967 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 DARS2Q6PI48 645 aaKnown RBP4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 DPY19L3Q6ZPD9 716 aa4.44□□□□□ -1.7
NSMCE4A-210ENST00000483541 MICU3Q86XE3 530 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms