RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 FAM193AP78312 1265 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 NOP14P78316 857 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 RPL6Q02878 288 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 GFPT1Q06210 699 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 SEMA3BQ13214 749 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 RABEP1Q15276 862 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 DUOXA1Q1HG43 343 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 DUOXA2Q1HG44 320 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 MDH1BQ5I0G3 518 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 SPDYCQ5MJ68 293 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 LY6G5CQ5SRR4 150 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 BRAPQ7Z569 592 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 PIP4P1Q86T03 277 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 GPD1LQ8N335 351 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 HDDC3Q8N4P3 179 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 CHCHD4Q8N4Q1 142 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 KIAA1958Q8N8K9 716 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 NAT16Q8N8M0 369 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 ANKRD36BP1Q96IX9 119 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 C8orf48Q96LL4 319 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 CEP295NLQ96MC4 621 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 MRPL45Q9BRJ2 306 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 PANK2Q9BZ23 570 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 EHD2Q9NZN4 543 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 STK17AQ9UEE5 414 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 SLC6A14Q9UN76 642 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 SMC3Q9UQE7 1217 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 CLIC4Q9Y696 253 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 ZFYVE26Q68DK2 2539 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 BAHCC1Q9P281 2608 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF233A6NK53 670 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 UPK3BL1B0FP48 263 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 UPK3BL2E5RIL1 263 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 TAF4O00268 1085 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 AP5Z1O43299 807 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 OPHN1O60890 802 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 OLFM2O95897 454 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CST3P01034 146 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 TNNC2P02585 160 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 PTPN1P18031 435 aaKnown RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 GABRG2P18507 467 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 DPP6P42658 865 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 WASP42768 502 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CACNA2D1P54289 1103 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 GAD2Q05329 585 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF33AQ06730 810 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 IFRD2Q12894 506 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ALCAMQ13740 583 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ACAP1Q15027 740 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 BTBD8Q5XKL5 378 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CBWD2Q8IUF1 395 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF513Q8N8E2 541 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 RDH13Q8NBN7 331 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 OR2I1PQ8NGU4 316 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 OR6B3Q8NGW1 331 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CEP76Q8TAP6 659 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CLIC6Q96NY7 704 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 SLITRK1Q96PX8 696 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ARID3AQ99856 593 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF518BQ9C0D4 1074 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 SNX25Q9H3E2 840 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 OLFML3Q9NRN5 406 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 PANK4Q9NVE7 773 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 TBC1D14Q9P2M4 693 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 DEC1Q9P2X7 70 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 CHORDC1Q9UHD1 332 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 FBXO2Q9UK22 296 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-206ENST00000483030 NME7Q9Y5B8 376 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 TSC2P49815 1807 aa7.86□□□□□ -1.15
CSDE1-206ENST00000483030 ZZEF1O43149 2961 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 EML5Q05BV3 1969 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 E2F8A0AVK6 867 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 FRMD3A2A2Y4 597 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 H0Y626 953 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 CLDN5O00501 218 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 KIAA0391O15091 583 aaKnown RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 TRIM24O15164 1050 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 ZBTB24O43167 697 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 COCHO43405 550 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 TULP3O75386 442 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 TRIM16O95361 564 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 SERPINF2P08697 491 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 DLATP10515 647 aaKnown RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 CD59P13987 128 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 YWHAQP27348 245 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 HOXD12P35452 270 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 MMRN1Q13201 1228 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 SURF1Q15526 300 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 ANO4Q32M45 955 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 WDR72Q3MJ13 1102 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 C10orf76Q5T2E6 689 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 HECTD3Q5T447 861 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 SLC36A4Q6YBV0 504 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms