RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 RAPGEF1Q13905 1077 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 KRT31Q15323 416 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 TRIM65Q6PJ69 517 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 SCAMP5Q8TAC9 235 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 LMO3Q8TAP4 145 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 TRMT2BQ96GJ1 504 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 FAXDC2Q96IV6 333 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 LSM14BQ9BX40 385 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 PLA2G2FQ9BZM2 168 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
SPTLC1-206ENST00000482632 MIA3Q5JRA6 1907 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 TECTAO75443 2155 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 TRAV19A0A0A6YYK7 116 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 C2orf78A6NCI8 922 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 M0QYV0 167 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 ECI2O75521 394 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 TADA3O75528 432 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 SRFP11831 508 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 NPR3P17342 541 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 ACO1P21399 889 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 DDX6P26196 483 aaKnown RBP eCLIP10.56□□□□□ -0.725e-6■■□□□ 14.2
SPTLC1-206ENST00000482632 PON1P27169 355 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 GDI1P31150 447 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 GCNT1Q02742 428 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 MIIPQ5JXC2 388 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 FKBP15Q5T1M5 1219 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 PHLDB3Q6NSJ2 640 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 VITQ6UXI7 678 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 CLEC20AQ6ZU45 233 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 CMTM8Q8IZV2 173 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 SIX5Q8N196 739 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 ARL14EPQ8N8R7 260 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 FLCNQ8NFG4 579 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 UBA3Q8TBC4 463 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 PBXIP1Q96AQ6 731 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 ELSPBP1Q96BH3 223 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 KREMEN1Q96MU8 473 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 TRMT61BQ9BVS5 477 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 NACA2Q9H009 215 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 GMIPQ9P107 970 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 APEX2Q9UBZ4 518 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 TSPAN16Q9UKR8 245 aa10.56□□□□□ -0.72
SPTLC1-206ENST00000482632 CFAP54Q96N23 3096 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 ZNF263O14978 683 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 THAP12O43422 761 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 PRAMEF12O95522 483 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 USP17L7P0C7H9 530 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 MBL2P11226 248 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 VDRP11473 427 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 FCARP24071 287 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 GCGRP47871 477 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 ZNF165P49910 485 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 COPB1P53618 953 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 BCAT1P54687 386 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 GPC5P78333 572 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 CC2D1AQ6P1N0 951 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 ENOSF1Q7L5Y1 443 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 GPRIN1Q7Z2K8 1008 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 TMEM150AQ86TG1 271 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 MON1AQ86VX9 555 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 SUGP1Q8IWZ8 645 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 PDZD8Q8NEN9 1154 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 ZMIZ2Q8NF64 920 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 CSGALNACT1Q8TDX6 532 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 FAM81BQ96LP2 452 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 MYRFLQ96LU7 910 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 CEP295NLQ96MC4 621 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 CYP2S1Q96SQ9 504 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 TTLL2Q9BWV7 592 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 DUSP16Q9BY84 665 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 FBXO44Q9H4M3 255 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 SMPD4Q9NXE4 827 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 DNAJC12Q9UKB3 198 aa10.55□□□□□ -0.72
SPTLC1-206ENST00000482632 GTPBP10A4D1E9 387 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 GOLGA8CPA6NN73 597 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 RNF225M0QZC1 329 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PIK3R2O00459 728 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 CYP26A1O43174 497 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 RNF40O75150 1001 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PDGFBP01127 241 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PAEPP09466 180 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 IRF1P10914 325 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PSMC3P17980 439 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 HDCP19113 662 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 GNA15P30679 374 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 RGS7P49802 495 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PDE6CP51160 858 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 TPM4P67936 248 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 UBXN1Q04323 297 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 PDE4CQ08493 712 aa10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 BST2Q10589 180 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-206ENST00000482632 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms