RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 NFE2Q16621 373 aaPredicted RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 C4orf17Q53FE4 359 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 EFHC2Q5JST6 749 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 DGKKQ5KSL6 1271 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 PKN3Q6P5Z2 889 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 CBWD2Q8IUF1 395 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 SPATA2LQ8IUW3 424 aaPredicted RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 GPD1LQ8N335 351 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 LRRC52Q8N7C0 313 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 USP13Q92995 863 aaPredicted RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 DHX58Q96C10 678 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 ACBD6Q9BR61 282 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 TMEM206Q9H813 350 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 SIX4Q9UIU6 781 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 ITGA11Q9UKX5 1188 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 OTOL1A6NHN0 477 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 K7ESF4 209 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 SPTLC2O15270 562 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ATP2C2O75185 946 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 TNNC2P02585 160 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CSH1P0DML2 217 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CSH2P0DML3 217 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 MSX1P28360 303 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 RPL10AP62906 217 aaKnown RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ASIC1P78348 528 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 LMNB2Q03252 620 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 RING1Q06587 406 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ALCAMQ13740 583 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 SOWAHAQ2M3V2 549 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 NAIF1Q69YI7 327 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 LAIR1Q6GTX8 287 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CC2D1AQ6P1N0 951 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 C1orf228Q6PIY5 440 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 STXBP4Q6ZWJ1 553 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CEP68Q76N32 757 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 MON1AQ86VX9 555 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 TMEM86AQ8N2M4 240 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 OR5B17Q8NGF7 314 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 RIN3Q8TB24 985 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 HPDLQ96IR7 371 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ANKRD36BP1Q96IX9 119 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 SLC22A12Q96S37 553 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 CYP2S1Q96SQ9 504 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 MMS19Q96T76 1030 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 HPS4Q9NQG7 708 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 TDP1Q9NUW8 608 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 POLR3BQ9NW08 1133 aaPredicted RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 ZMIZ1Q9ULJ6 1067 aa9.63□□□□□ -0.87
HLA-B-253ENST00000481849 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.63□□□□□ -0.87
HLA-B-253ENST00000481849 COL4A2P08572 1712 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 KALRNO60229 2985 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 ZNF233A6NK53 670 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 MSTNO14793 375 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CLIC2O15247 247 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 TADA3O75528 432 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 EGFP01133 1207 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CKMP06732 381 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 PDGFRBP09619 1106 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 DLATP10515 647 aaKnown RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 TGM1P22735 817 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LMO2P25791 158 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.871e-7■□□□□ 8.8
HLA-B-253ENST00000481849 CASP1P29466 404 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 WEE1P30291 646 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 HOXD13P35453 343 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LHX1P48742 406 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 NASPP49321 788 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CYP2J2P51589 502 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 GRSF1Q12849 480 aaKnown RBP eCLIP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 MYO1EQ12965 1108 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CCINQ13939 588 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LBRQ14739 615 aaKnown RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 SOWAHCQ53LP3 525 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 FSTL4Q6MZW2 842 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 NELFCDQ8IXH7 590 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 TOP6BLQ8N6T0 577 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 GALNT6Q8NCL4 622 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LINC00301Q8NCQ3 95 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 LEO1Q8WVC0 666 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 MYLPFQ96A32 169 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CCDC127Q96BQ5 260 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CHFRQ96EP1 664 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms