RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	SMARCD1	Q96GM5	515 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	B3GNT5	Q9BYG0	378 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	GTPBP4	Q9BZE4	634 aa	Known RBP	11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	ARRDC1-AS1	Q9H2J1	176 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	SMOC1	Q9H4F8	434 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	SLC8A2	Q9UPR5	921 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	NBEA	Q8NFP9	2946 aa		11.11	□□□□□ -0.63
GGA1-219	ENST00000481613	OTOL1	A6NHN0	477 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	LEFTY2	O00292	366 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	ZNF202	O95125	648 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	KCNK5	O95279	499 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	VNN1	O95497	513 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	OLFM2	O95897	454 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	ASS1	P00966	412 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	OAS1	P00973	400 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	NR2F2	P24468	414 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	PSMC2	P35998	433 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	VAMP7	P51809	220 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	CDH8	P55286	799 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	USP46	P62068	366 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	DPYD	Q12882	1025 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	TAF10	Q12962	218 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	BECN1	Q14457	450 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	STPG1	Q5TH74	334 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	SNX30	Q5VWJ9	437 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	FSTL4	Q6MZW2	842 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	FBXO32	Q969P5	355 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	ACD	Q96AP0	544 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	FAXDC2	Q96IV6	333 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	SLC22A12	Q96S37	553 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	MED10	Q9BTT4	135 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	ZNF518B	Q9C0D4	1074 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	DPEP3	Q9H4B8	488 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	SMYD3	Q9H7B4	428 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	CYP3A43	Q9HB55	503 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	IL37	Q9NZH6	218 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	TBC1D14	Q9P2M4	693 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	ZMIZ1	Q9ULJ6	1067 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	NME7	Q9Y5B8	376 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	GTF3C3	Q9Y5Q9	886 aa		11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-219	ENST00000481613	TICRR	Q7Z2Z1	1910 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	GOLGA6L4	A6NEF3	574 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	CLDN5	O00501	218 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	STX10	O60499	249 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	AKAP3	O75969	853 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	ABL1	P00519	1130 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	GTF2H1	P32780	548 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	PIK3CA	P42336	1068 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	PXN	P49023	591 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	TUB	P50607	506 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	DLG4	P78352	724 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	ADAM9	Q13443	819 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	EDRF1	Q3B7T1	1238 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	PREPL	Q4J6C6	727 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	CEP68	Q76N32	757 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	FAM35A	Q86V20	835 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	KBTBD6	Q86V97	674 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	FAM186B	Q8IYM0	893 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	ADGRG2	Q8IZP9	1017 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	TTC39C	Q8N584	583 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	TTC16	Q8NEE8	873 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	RIN3	Q8TB24	985 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	OTUB2	Q96DC9	234 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	LOXL4	Q96JB6	756 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	DUSP9	Q99956	384 aa	Known RBP	11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	FBXO44	Q9H4M3	255 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	CSNK1G1	Q9HCP0	422 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	RMND1	Q9NWS8	449 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	CPQ	Q9Y646	472 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	WNT6	Q9Y6F9	365 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	TCHH	Q07283	1943 aa		11.09	□□□□□ -0.63
GGA1-219	ENST00000481613	GREB1	Q4ZG55	1949 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	E2F8	A0AVK6	867 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	FAM92A	A1XBS5	289 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	TNFRSF10B	O14763	440 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	RNF40	O75150	1001 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	AP1G2	O75843	785 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	EGF	P01133	1207 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	HLA-DRA	P01903	254 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	SPINK2	P20155	84 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	EIF2D	P41214	584 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	SLC5A3	P53794	718 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	CACNA2D1	P54289	1103 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	MCCD1	P59942	119 aa	Predicted RBP	11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	NUCB2	P80303	420 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	HECTD3	Q5T447	861 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	SCARA5	Q6ZMJ2	495 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	PAQR9	Q6ZVX9	377 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	SYT13	Q7L8C5	426 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	ACOT1	Q86TX2	421 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	FUK	Q8N0W3	1084 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	DDX1	Q92499	740 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	KCNK16	Q96T55	309 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	NT5C1A	Q9BXI3	368 aa		11.08	□□□□□ -0.64
GGA1-219	ENST00000481613	RNF38	Q9H0F5	515 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 111 ms