RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
HDAC1-207ENST00000481281 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
HDAC1-207ENST00000481281 CETN1Q12798 172 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 LRMPQ12912 555 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 RUNX3Q13761 415 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 C1orf210Q8IVY1 113 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 TTC8Q8TAM2 541 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
HDAC1-207ENST00000481281 DUSP16Q9BY84 665 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 EBF3Q9H4W6 596 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 CPQQ9Y646 472 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
HDAC1-207ENST00000481281 LEFTY2O00292 366 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 COCHO43405 550 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 CHRNB1P11230 501 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 NBL1P41271 181 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 PGFP49763 221 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 KIF11P52732 1056 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 EML3Q32P44 896 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 HECTD3Q5T447 861 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 MAML2Q8IZL2 1156 aaPredicted RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 IER2Q9BTL4 223 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 DUS2Q9NX74 493 aaKnown RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 CHORDC1Q9UHD1 332 aaPredicted RBP13.77□□□□□ -0.21
HDAC1-207ENST00000481281 SCML2Q9UQR0 700 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
HDAC1-207ENST00000481281 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-207ENST00000481281 IFNAR2P48551 515 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 GCNT1Q02742 428 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 MAMSTRQ6ZN01 415 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 RBM43Q6ZSC3 357 aaKnown RBP13.76□□□□□ -0.21
HDAC1-207ENST00000481281 CCDC186Q7Z3E2 898 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 DDX42Q86XP3 938 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC1-207ENST00000481281 PPM1KQ8N3J5 372 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 KAT5Q92993 513 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 UBXN6Q9BZV1 441 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 CCSER2Q9H7U1 834 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 ECT2Q9H8V3 914 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 LMAN1LQ9HAT1 526 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
HDAC1-207ENST00000481281 SPATA6Q9NWH7 488 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-207ENST00000481281 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 FBXO4Q9UKT5 387 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 USP3Q9Y6I4 520 aa13.76□□□□□ -0.21
HDAC1-207ENST00000481281 O00370 1275 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 CYP26A1O43174 497 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 LAMTOR5O43504 91 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 TLR5O60602 858 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 PAEPP09466 180 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 SP9P0CG40 484 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 VDRP11473 427 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-207ENST00000481281 GJA4P35212 333 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 MTAPQ13126 283 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 CCINQ13939 588 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 LRRC32Q14392 662 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 PON2Q15165 354 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 RAB41Q5JT25 222 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 DGKKQ5KSL6 1271 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 PIGZQ86VD9 579 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 ARHGEF19Q8IW93 802 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
HDAC1-207ENST00000481281 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-207ENST00000481281 OSER1Q9NX31 292 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 DACH1Q9UI36 760 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 KIAA1257Q9ULG3 409 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 KIAA1549LQ6ZVL6 1849 aa13.75□□□□□ -0.21
HDAC1-207ENST00000481281 TRDMT1O14717 391 aaKnown RBP13.74□□□□□ -0.21
HDAC1-207ENST00000481281 NFATC1O95644 943 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 CD19P15391 556 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 MRE11P49959 708 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 ZNF132P52740 706 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 BCAT1P54687 386 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 AMPD2Q01433 879 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 GAS6Q14393 721 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 PKDCCQ504Y2 493 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms