RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 CASQ2O14958 399 aaPredicted RBP8.62□□□□□ -1.03
LSM5-210ENST00000480956 PGRMC2O15173 223 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 SMPD2O60906 423 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 PPP6R2O75170 966 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 BTF3P20290 206 aaKnown RBP8.62□□□□□ -1.03
LSM5-210ENST00000480956 MTHFRP42898 656 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 NRG3P56975 720 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 TDGQ13569 410 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 NFIXQ14938 502 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 MED22Q15528 200 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 TOR1AIP1Q5JTV8 583 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 DCAF12L1Q5VU92 463 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 OLFML2BQ68BL8 750 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 RINT1Q6NUQ1 792 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 PLEKHM3Q6ZWE6 761 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 PLPPR4Q7Z2D5 763 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 WDR63Q8IWG1 891 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 PCSK9Q8NBP7 692 aaKnown RBP8.62□□□□□ -1.03
LSM5-210ENST00000480956 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 DENND6BQ8NEG7 585 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 LINS1Q8NG48 757 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 CCHCR1Q8TD31 782 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 HOXB13Q92826 284 aaPredicted RBP8.62□□□□□ -1.03
LSM5-210ENST00000480956 NT5C3AQ9H0P0 336 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 SUGCTQ9HAC7 445 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
LSM5-210ENST00000480956 GULP1Q9UBP9 304 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 KDM3AQ9Y4C1 1321 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 ELOA3CA0A087WX78 387 aaPredicted RBP8.61□□□□□ -1.03
LSM5-210ENST00000480956 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
LSM5-210ENST00000480956 TSC22D2O75157 780 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 KIAA0754O94854 1291 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 KIF20AO95235 890 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 OLFM2O95897 454 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 ALADP13716 330 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 PFKLP17858 780 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 IL10P22301 178 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 PIK3CGP48736 1102 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 PCBP3P57721 371 aaKnown RBP8.61□□□□□ -1.03
LSM5-210ENST00000480956 STARD6P59095 220 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 ZKSCAN8Q15776 578 aaPredicted RBP8.61□□□□□ -1.03
LSM5-210ENST00000480956 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 C9orf152Q5JTZ5 239 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 MRNIPQ6NTE8 343 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 RASGRP3Q8IV61 690 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 IQCF2Q8IXL9 164 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 FIBINQ8TAL6 211 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 SETD6Q8TBK2 473 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 CRACR2AQ9BSW2 395 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 NRIP3Q9NQ35 241 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
LSM5-210ENST00000480956 GALNT8Q9NY28 637 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 TAS2R3Q9NYW6 316 aa8.61□□□□□ -1.03
LSM5-210ENST00000480956 SSU72P8A0A1W2PR75 194 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 A4D1N5 150 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 MEGF11A6BM72 1044 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 URADA6NGE7 173 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 MYO1GB0I1T2 1018 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 F2RL2O00254 374 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 RIPK2O43353 540 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 PDE8BO95263 885 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 CBX7O95931 251 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 ANXA6P08133 673 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 KIR3DL1P43629 444 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 NT5C2P49902 561 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 ARFIP1P53367 373 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 TEKQ02763 1124 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 NOLC1Q14978 699 aaKnown RBP eCLIP8.6□□□□□ -1.03
LSM5-210ENST00000480956 NTRK2Q16620 822 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 ZNF628Q5EBL2 1059 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 MROH9Q5TGP6 573 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 WDR93Q6P2C0 686 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 ADGRA1Q86SQ6 560 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 RHOT2Q8IXI1 618 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 ADGRF2Q8IZF7 708 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 SMG8Q8ND04 991 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 SPSB4Q96A44 273 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 FER1L6-AS2Q96M78 137 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 GCNAQ96QF7 691 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 NTPCRQ9BSD7 190 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 POLR3CQ9BUI4 534 aaPredicted RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 HECAQ9UBI9 543 aaPredicted RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 ZC3H7BQ9UGR2 993 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 TCFL5Q9UL49 500 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 C2CD2Q9Y426 696 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 MYBBP1AQ9BQG0 1328 aaKnown RBP8.6□□□□□ -1.03
LSM5-210ENST00000480956 LIPT2A6NK58 231 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 SAC3D1A6NKF1 404 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 EFCAB8A8MWE9 144 aa8.6□□□□□ -1.03
LSM5-210ENST00000480956 CACNB4O00305 520 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms