RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TRMT61BQ9BVS5 477 aaKnown RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 NT5C1AQ9BXI3 368 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 CNTNAP3Q9BZ76 1288 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 LMAN1LQ9HAT1 526 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 TRPV5Q9NQA5 729 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 APEX2Q9UBZ4 518 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PCDHB5Q9Y5E4 795 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 FHOD1Q9Y613 1164 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PIAS3Q9Y6X2 628 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 SDK1Q7Z5N4 2213 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 HEPACAM2A8MVW5 462 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 K7ESF4 209 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 RNF225M0QZC1 329 aaPredicted RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 ZNF197O14709 1029 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 EPHB6O15197 1021 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 NCAM2O15394 837 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 HRO43593 1189 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 KRT37O76014 449 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 NOL4O94818 638 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 MYL4P12829 197 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 CD19P15391 556 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 ACO1P21399 889 aaKnown RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 BDNFP23560 247 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 CYP2F1P24903 491 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 SOX9P48436 509 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 GPR15P49685 360 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 RAD23BP54727 409 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 GCNT1Q02742 428 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 SRSF5Q13243 272 aaKnown RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 NR1I3Q14994 352 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 MGAT5BQ3V5L5 792 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 SDHAF4Q5VUM1 108 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 FAM171BQ6P995 826 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 TXNDC11Q6PKC3 985 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 Q6ZS52 159 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 MFSD6LQ8IWD5 586 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 SCN4BQ8IWT1 228 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 UBR7Q8N806 425 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 SLC4A11Q8NBS3 891 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 RBBP8NLQ8NC74 664 aaPredicted RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 STKLD1Q8NE28 680 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 MYCBPAPQ8TBZ2 947 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 FAM3CQ92520 227 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 PCED1BQ96HM7 432 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 TMEM176AQ96HP8 235 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 FAXDC2Q96IV6 333 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 TNIP3Q96KP6 325 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 ANP32EQ9BTT0 268 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 B3GNT5Q9BYG0 378 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 ZNF518BQ9C0D4 1074 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 XPO4Q9C0E2 1151 aaKnown RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 GANQ9H2C0 597 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 NLRC4Q9NPP4 1024 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 RBM12Q9NTZ6 932 aaKnown RBP9.6□□□□□ -0.87
VCP-206ENST00000480327 SIK3Q9Y2K2 1263 aa9.6□□□□□ -0.87
VCP-206ENST00000480327 PTPRDP23468 1912 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 A0A1W2PRU2 124 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 FOXN3O00409 490 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 MAN2B1O00754 1011 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 AP5Z1O43299 807 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 HAPLN1P10915 354 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 UCHL3P15374 230 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 TRIM21P19474 475 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 POLR2FP61218 127 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 DRAP1Q14919 205 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 MAPRE1Q15691 268 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 DDR2Q16832 855 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 CYP4A22Q5TCH4 519 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 C4orf50Q6ZRC1 276 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 GAREM2Q75VX8 874 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 CRYBG2Q8N1P7 616 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 SPPL2BQ8TCT7 592 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 SLC2A14Q8TDB8 520 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 GIPC2Q8TF65 315 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 DEPDC1BQ8WUY9 529 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 IRF7Q92985 503 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 JAKMIP2Q96AA8 810 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 ZNF512Q96ME7 567 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 ERGIC2Q96RQ1 377 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 FAM126AQ9BYI3 521 aaPredicted RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 PLCB1Q9NQ66 1216 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 ASAH2Q9NR71 780 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 MRPS17Q9Y2R5 130 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
VCP-206ENST00000480327 CHD6Q8TD26 2715 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 MYH10P35580 1976 aa9.59□□□□□ -0.87
VCP-206ENST00000480327 NUP205Q92621 2012 aa9.58□□□□□ -0.88
VCP-206ENST00000480327 SLC38A8A6NNN8 435 aa9.58□□□□□ -0.88
VCP-206ENST00000480327 CHURC1-FNTBB4DL54 471 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms