RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TRMT2BQ96GJ1 504 aaKnown RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 PDLIM2Q96JY6 352 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 CNGB3Q9NQW8 809 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 IL37Q9NZH6 218 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 ADAM22Q9P0K1 906 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 SCML2Q9UQR0 700 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-205ENST00000480067 ZNF197O14709 1029 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 NRDCO43847 1150 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 RTN2O75298 545 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 FBXO21O94952 628 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 MYL4P12829 197 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PPP3CCP48454 512 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 CCDC173Q0VFZ6 552 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
CLDN11-205ENST00000480067 MMS22LQ6ZRQ5 1243 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 MON1AQ86VX9 555 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-205ENST00000480067 ZDHHC17Q8IUH5 632 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PDZD8Q8NEN9 1154 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 RIPOR3Q96MK2 946 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 TAS2R14Q9NYV8 317 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 TRPM5Q9NZQ8 1165 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 CD207Q9UJ71 328 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 NAGPAQ9UK23 515 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 COG5Q9UP83 839 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 PLXNA3P51805 1871 aa11.77□□□□□ -0.53
CLDN11-205ENST00000480067 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 SOWAHDA6NJG2 315 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 SART1O43290 800 aaKnown RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 GABBR2O75899 941 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ABL1P00519 1130 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ERBB2P04626 1255 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 CALB1P05937 261 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 FECHP22830 423 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 GABRR2P28476 465 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 GABRB2P47870 512 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 EPHA5P54756 1037 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 SPA17Q15506 151 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 OR6B2Q6IFH4 312 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ARHGAP18Q8N392 663 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 SMRP1Q8NCR6 262 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 CCDC112Q8NEF3 446 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 OLIG1Q8TAK6 271 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 VCPIP1Q96JH7 1222 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 C11orf70Q9BRQ4 267 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 LRRC3Q9BY71 257 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ISCUQ9H1K1 167 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ZNF334Q9HCZ1 680 aaPredicted RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 SPTLC3Q9NUV7 552 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 STRIP2Q9ULQ0 834 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
CLDN11-205ENST00000480067 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
CLDN11-205ENST00000480067 A0A1W2PRU2 124 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 PAPSS1O43252 624 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 F11P03951 625 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 FSHRP23945 695 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 CDC25CP30307 473 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 MTHFRP42898 656 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 NTHL1P78549 312 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 MRPS5P82675 430 aaKnown RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 ZNF268Q14587 947 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 TOGARAM2Q6ZUX3 1019 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 MCOLN2Q8IZK6 566 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 SCML4Q8N228 414 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 IRGQQ8WZA9 623 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 NDRG1Q92597 394 aaKnown RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 MRPS31Q92665 395 aaKnown RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 NECTIN4Q96NY8 510 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 WDR6Q9NNW5 1121 aaKnown RBP11.75□□□□□ -0.53
CLDN11-205ENST00000480067 GMIPQ9P107 970 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 TJP2Q9UDY2 1190 aa11.75□□□□□ -0.53
CLDN11-205ENST00000480067 EPN1Q9Y6I3 576 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms