RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
HPS1-212ENST00000480020 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
HPS1-212ENST00000480020 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 ARNTLO00327 626 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 DPYSL4O14531 572 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 ABL1P00519 1130 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 PNMA6AP0CW24 399 aaPredicted RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 SETSIPP0DME0 302 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 UCHL3P15374 230 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 HDCP19113 662 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 RFX1P22670 979 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 GDI1P31150 447 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 USP8P40818 1118 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 TUBP50607 506 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 PDE6CP51160 858 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 SLC8A3P57103 927 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 SLC7A9P82251 487 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 HFE2Q6ZVN8 426 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 BMP8AQ7Z5Y6 402 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 LRFN3Q9BTN0 628 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 OSER1Q9NX31 292 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 FBXL21Q9UKT6 434 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
HPS1-212ENST00000480020 NUP210Q8TEM1 1887 aaPredicted RBP13.12□□□□□ -0.31
HPS1-212ENST00000480020 ZNF638Q14966 1978 aaKnown RBP13.11□□□□□ -0.31
HPS1-212ENST00000480020 M0QYV0 167 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 EPHB6O15197 1021 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 CHADO15335 359 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 COCHO43405 550 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 GABBR2O75899 941 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 CAVIN2O95810 425 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 CKMP06732 381 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 TCF3P15923 654 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 GNA15P30679 374 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 TKTL1P51854 596 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ZXDBP98169 803 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 PFKPQ01813 784 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 USP4Q13107 963 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 RAPGEF1Q13905 1077 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 SYCP1Q15431 976 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ZNF77Q15935 545 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 MEA1Q16626 185 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 HECTD3Q5T447 861 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 PMF1Q6P1K2 205 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 SCD5Q86SK9 330 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 SIX5Q8N196 739 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ZNF606Q8WXB4 792 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 KCTD13Q8WZ19 329 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 DNASE1L2Q92874 299 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 NMUR1Q9HB89 426 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 TRPV5Q9NQA5 729 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ARHGEF3Q9NR81 526 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 TLR8Q9NR97 1041 aaKnown RBP13.11□□□□□ -0.31
HPS1-212ENST00000480020 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
HPS1-212ENST00000480020 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 F8VZ95 297 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 ZNF263O14978 683 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 THAP12O43422 761 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 MED7O43513 233 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 CLCN1P35523 988 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 GPD2P43304 727 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 UBXN1Q04323 297 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 PM20D1Q6GTS8 502 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 SH3RF2Q8TEC5 729 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 IRF7Q92985 503 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
HPS1-212ENST00000480020 STK33Q9BYT3 514 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 ULBP1Q9BZM6 244 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
HPS1-212ENST00000480020 FAM207AQ9NSI2 230 aaPredicted RBP13.1□□□□□ -0.31
HPS1-212ENST00000480020 CPQQ9Y646 472 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms