RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COL4A2P08572 1712 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 MTMR11A4FU01 709 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 HEPACAM2A8MVW5 462 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 K7ESF4 209 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 GFPT2O94808 682 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SERPINC1P01008 464 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 OR4Q2P0C623 313 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 CCDC172P0C7W6 258 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SETSIPP0DME0 302 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 VDRP11473 427 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PFKLP17858 780 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 GDI1P31150 447 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 CDH5P33151 784 aaPredicted RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 NDST1P52848 882 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ATXN1P54253 815 aaKnown RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 RAD23BP54727 409 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SPECC1LQ69YQ0 1117 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SPOPLQ6IQ16 392 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PPP1R2P3Q6NXS1 205 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 LCLAT1Q6UWP7 414 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 TMEM150AQ86TG1 271 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 LRRTM3Q86VH5 581 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ARID3BQ8IVW6 561 aaPredicted RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 VSTM4Q8IW00 320 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ZNF276Q8N554 614 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 CELF5Q8N6W0 485 aaKnown RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 KIAA1958Q8N8K9 716 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SLC4A11Q8NBS3 891 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ATRIPQ8WXE1 791 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 FAM3CQ92520 227 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 BAP1Q92560 729 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 TATDN2Q93075 761 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 CHFRQ96EP1 664 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 TRMT2BQ96GJ1 504 aaKnown RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 TMEM176AQ96HP8 235 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 FAM84AQ96KN4 292 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 C8orf48Q96LL4 319 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 TMEM209Q96SK2 561 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 MMS19Q96T76 1030 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PI4K2AQ9BTU6 479 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 TTLL2Q9BWV7 592 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 SNX25Q9H3E2 840 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 BRD9Q9H8M2 597 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PARD6AQ9NPB6 346 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 CRTAC1Q9NQ79 661 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 ASAH2Q9NR71 780 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 IL37Q9NZH6 218 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
DDX56-211ENST00000479602 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 PCDHB5Q9Y5E4 795 aa9.43□□□□□ -0.9
DDX56-211ENST00000479602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.9
DDX56-211ENST00000479602 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 A8MXQ7 604 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 O00370 1275 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 ZNF263O14978 683 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 TRIM66O15016 1216 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 HRO43593 1189 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 FGF19O95750 216 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 LSM8O95777 96 aaKnown RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 MYL4P12829 197 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 FECHP22830 423 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 GSCP56915 257 aaPredicted RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 CDK17Q00537 523 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 CCINQ13939 588 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 CNGA2Q16280 664 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 RSPO4Q2I0M5 234 aaPredicted RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 STXBP5Q5T5C0 1151 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 TXNDC11Q6PKC3 985 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 DGLUCYQ7Z3D6 616 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 ARHGEF19Q8IW93 802 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 FUKQ8N0W3 1084 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 SPEM1Q8N4L4 309 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 TTC9BQ8N6N2 239 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 OVCA2Q8WZ82 227 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 MSANTD3Q96H12 275 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 PCED1BQ96HM7 432 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 ARID3AQ99856 593 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 FAM83CQ9BQN1 747 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 SYT11Q9BT88 431 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 SLC46A2Q9BY10 475 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 XPO4Q9C0E2 1151 aaKnown RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 LHX5Q9H2C1 402 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 C8orf33Q9H7E9 229 aaPredicted RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 C2orf42Q9NWW7 574 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 DNAJC12Q9UKB3 198 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 CAPN11Q9UMQ6 739 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms