RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 SMPD4Q9NXE4 827 aa6.33□□□□□ -1.4
BRAF-203ENST00000479537 KIF17Q9P2E2 1029 aa6.33□□□□□ -1.4
BRAF-203ENST00000479537 VNN1O95497 513 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 KLRK1P26718 216 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 BMPR1AP36894 532 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 SP2Q02086 613 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 RALBP1Q15311 655 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
BRAF-203ENST00000479537 LY6KQ17RY6 165 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 TANGO2Q6ICL3 276 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 NRSN1Q8IZ57 195 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 FAM109AQ8N4B1 249 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 TTC9BQ8N6N2 239 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 IL17DQ8TAD2 202 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 ZDHHC12Q96GR4 267 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 C20orf173Q96LM9 149 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 ADAM2Q99965 735 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 BRD8Q9H0E9 1235 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 TP63Q9H3D4 680 aaPredicted RBP6.32□□□□□ -1.4
BRAF-203ENST00000479537 CASS4Q9NQ75 786 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 LPAR3Q9UBY5 353 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 VPS51Q9UID3 782 aa6.32□□□□□ -1.4
BRAF-203ENST00000479537 ADM5C9JUS6 153 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 AGPSO00116 658 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 PSMD9O00233 223 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 SPDEFO95238 335 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 NTSR2O95665 410 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 AGR2O95994 175 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 ANXA6P08133 673 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 CD53P19397 219 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 ITIH3Q06033 890 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 SCAPQ12770 1279 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 TP53BP2Q13625 1128 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 TRIM71Q2Q1W2 868 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 BTBD16Q32M84 506 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 SLC9A4Q6AI14 798 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 MOGAT3Q86VF5 341 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 SLC44A2Q8IWA5 706 aaPredicted RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 OTUD7AQ8TE49 926 aaPredicted RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 WDR60Q8WVS4 1066 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 LPIN2Q92539 896 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 GLG1Q92896 1179 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 C3orf49Q96BT1 292 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 R3HDM4Q96D70 268 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 PLEKHG4BQ96PX9 1271 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 EIF3CQ99613 913 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 VN1R3Q9BXE9 311 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 TAF1DQ9H5J8 278 aaPredicted RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 CEP72Q9P209 647 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 ANAPC4Q9UJX5 808 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 DRG1Q9Y295 367 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 SLC27A6Q9Y2P4 619 aa6.31□□□□□ -1.4
BRAF-203ENST00000479537 LRRFIP2Q9Y608 721 aaKnown RBP6.31□□□□□ -1.4
BRAF-203ENST00000479537 RRN3P2A6NIE6 340 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 LPXNO60711 386 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 RHOP08100 348 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 ITGAMP11215 1152 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 CLCN2P51788 898 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 HNRNPMP52272 730 aaKnown RBP eCLIP6.3□□□□□ -1.4
BRAF-203ENST00000479537 SLC25A3Q00325 362 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
BRAF-203ENST00000479537 GRM4Q14833 912 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 RPS6KA2Q15349 733 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 SPDYAQ5MJ70 313 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 RAB11FIP2Q7L804 512 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 CAND1Q86VP6 1230 aaKnown RBP6.3□□□□□ -1.4
BRAF-203ENST00000479537 OR1N1Q8NGS0 311 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 MYCBPAPQ8TBZ2 947 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 AFG1LQ8WV93 481 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 XAGE5Q8WWM1 108 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 FKBP10Q96AY3 582 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 MYEOVQ96EZ4 313 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 TRAPPC9Q96Q05 1148 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 EIF2AK1Q9BQI3 630 aaKnown RBP6.3□□□□□ -1.4
BRAF-203ENST00000479537 DPCDQ9BVM2 203 aaPredicted RBP6.3□□□□□ -1.4
BRAF-203ENST00000479537 PABPC3Q9H361 631 aaKnown RBP6.3□□□□□ -1.4
BRAF-203ENST00000479537 ELAC1Q9H777 363 aaKnown RBP6.3□□□□□ -1.4
BRAF-203ENST00000479537 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 STEAP1Q9UHE8 339 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 RIMKLBQ9ULI2 386 aa6.3□□□□□ -1.4
BRAF-203ENST00000479537 A1L4Q6 167 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 EXOC5O00471 708 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 NCAM2O15394 837 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 SLC16A3O15427 465 aaKnown RBP6.29□□□□□ -1.4
BRAF-203ENST00000479537 PPP6R2O75170 966 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 PYGLP06737 847 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 CD19P15391 556 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 NR4A1P22736 598 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 PAPOLAP51003 745 aaKnown RBP6.29□□□□□ -1.4
BRAF-203ENST00000479537 ATXN1P54253 815 aaKnown RBP6.29□□□□□ -1.4
BRAF-203ENST00000479537 PRKAA2P54646 552 aa6.29□□□□□ -1.4
BRAF-203ENST00000479537 CTSWP56202 376 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms