RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CDK7P50613 346 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 USP46P62068 366 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 CLDN10P78369 228 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 CAV1Q03135 178 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 R3HDM1Q15032 1099 aaKnown RBP14.73□□□□□ -0.05
CCDC78-210ENST00000478979 APOBEC3FQ8IUX4 373 aaKnown RBP14.73□□□□□ -0.05
CCDC78-210ENST00000478979 RIBC1Q8N443 379 aaPredicted RBP14.73□□□□□ -0.05
CCDC78-210ENST00000478979 HSPH1Q92598 858 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 MINDY3Q9H8M7 445 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 PDGFCQ9NRA1 345 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 IP6K2Q9UHH9 426 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 NEU2Q9Y3R4 380 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 ADGRA2Q96PE1 1338 aa14.73□□□□□ -0.05
CCDC78-210ENST00000478979 A0A0G2JND7 137 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 ITGBL1O95965 494 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 CCNG2Q16589 344 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 CDO1Q16878 200 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 BRSK2Q8IWQ3 736 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 KATNAL2Q8IYT4 538 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 WDTC1Q8N5D0 677 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SEPT1Q8WYJ6 367 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 NSL1Q96IY1 281 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SPATC1LQ9H0A9 340 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 ETNK2Q9NVF9 386 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 HEY2Q9UBP5 337 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SMG5Q9UPR3 1016 aaKnown RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 STYXL1Q9Y6J8 313 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 WDR91A4D1P6 747 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 TOM1L1O75674 476 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 DUOXA2Q1HG44 320 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 FAM160B1Q5W0V3 765 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 LVRNQ6Q4G3 990 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SPOCD1Q6ZMY3 1216 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 PHF13Q86YI8 300 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 EXD1Q8NHP7 514 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SPATA33Q96N06 139 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 C12orf65Q9H3J6 166 aaKnown RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 TAS2R1Q9NYW7 299 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SNCAIPQ9Y6H5 919 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 TMEM191CA6NGB0 347 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 FZD9O00144 591 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 LIASO43766 372 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 DDNO94850 711 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 TROVE2P10155 538 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 GDF10P55107 478 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 NR1H3Q13133 447 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 EFTUD2Q15029 972 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 RAB6CQ53S08 254 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 CPB2Q96IY4 423 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 C12orf42Q96LP6 360 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 KLF6Q99612 283 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 CALN1Q9BXU9 219 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 NIF3L1Q9GZT8 377 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 RAB6CQ9H0N0 254 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 FBXO6Q9NRD1 293 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-210ENST00000478979 CYTH4Q9UIA0 394 aa14.72□□□□□ -0.05
CCDC78-210ENST00000478979 GOLGA8RI6L899 631 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 STAM2O75886 525 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 FAM200BP0CF97 657 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 DSG1Q02413 1049 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
CCDC78-210ENST00000478979 PTPN20Q4JDL3 420 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 MARK2Q7KZI7 788 aaKnown RBP14.71□□□□□ -0.05
CCDC78-210ENST00000478979 ZBTB8OSQ8IWT0 167 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 UBA3Q8TBC4 463 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 HIC2Q96JB3 615 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.05
CCDC78-210ENST00000478979 TXNRD2Q9NNW7 524 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 LCTP09848 1927 aa14.71□□□□□ -0.05
CCDC78-210ENST00000478979 A6NJR5 290 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 ATG7O95352 703 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 PSMC1P62191 440 aaKnown RBP14.71□□□□□ -0.06
CCDC78-210ENST00000478979 PDIA2Q13087 525 aaKnown RBP14.71□□□□□ -0.06
CCDC78-210ENST00000478979 Q3C1V9 767 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 ACBD5Q5T8D3 534 aaPredicted RBP14.71□□□□□ -0.06
CCDC78-210ENST00000478979 LBX2Q6XYB7 198 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 TRIM72Q6ZMU5 477 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 CCDC33Q8N5R6 958 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF513Q8N8E2 541 aaPredicted RBP14.71□□□□□ -0.06
CCDC78-210ENST00000478979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.71□□□□□ -0.06
CCDC78-210ENST00000478979 ZNF398Q8TD17 642 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 TWNKQ96RR1 684 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 SMYD3Q9H7B4 428 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 RHBDL2Q9NX52 303 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 GPRC5DQ9NZD1 345 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.06
CCDC78-210ENST00000478979 hCG_2014768A0A024R1R8 64 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 A0A1W2PPM1 405 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 OGTO15294 1046 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 HNRNPRO43390 633 aaKnown RBP14.7□□□□□ -0.06
CCDC78-210ENST00000478979 RNASEH1O60930 286 aaKnown RBP14.7□□□□□ -0.06
CCDC78-210ENST00000478979 MAFO75444 373 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-210ENST00000478979 NFICP08651 508 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 SERPINB3P29508 390 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 MAN1A1P33908 653 aa14.7□□□□□ -0.06
CCDC78-210ENST00000478979 SYDE1Q6ZW31 735 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms