RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 OGDHQ02218 1023 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 PALM2Q8IXS6 379 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 CLEC4DQ8WXI8 215 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 TTC25Q96NG3 672 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 KIAA1522Q9P206 1035 aaPredicted RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 FEM1BQ9UK73 627 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 CLUHO75153 1309 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 TCRBV7S3A2A0A539 114 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 GYG2O15488 501 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 VNN1O95497 513 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 OXSR1O95747 527 aaPredicted RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 COL6A2P12110 1019 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 GTF2H1P32780 548 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 BASP1P80723 227 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 COG7P83436 770 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 PGM5Q15124 567 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 ARHGEF16Q5VV41 709 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 NEPROQ6NW34 567 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 SCARA5Q6ZMJ2 495 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 SPOCD1Q6ZMY3 1216 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 PATL1Q86TB9 770 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 KBTBD2Q8IY47 623 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 FBXO36Q8NEA4 188 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 OR5B17Q8NGF7 314 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 DGCR14Q96DF8 476 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 FBXL18Q96ME1 805 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 FAM111AQ96PZ2 611 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 CCT7Q99832 543 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 TUT1Q9H6E5 874 aaKnown RBP11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 SYNCQ9H7C4 482 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 CARD8Q9Y2G2 431 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ALOX15BO15296 676 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TBX10O75333 385 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TPPPO94811 219 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 HAUS5O94927 633 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF252P-AS1Q0IIN9 211 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZACNQ401N2 412 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 PLEKHA7Q6IQ23 1121 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 C4orf50Q6ZRC1 276 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 RELL1Q8IUW5 271 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 RCOR2Q8IZ40 523 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF606Q8WXB4 792 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 MANSC1Q9H8J5 431 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 AGO2Q9UKV8 859 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 YDJCA8MPS7 323 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 FBP2O00757 339 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TIMM44O43615 452 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 RELAQ04206 551 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 MORF4L2Q15014 288 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 SLC45A4Q5BKX6 768 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 PCSK1NQ9UHG2 260 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 FAF1Q9UNN5 650 aaPredicted RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 MATN2O00339 956 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 C2CD2LO14523 706 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 PSMG1O95456 288 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 SNRPFP62306 86 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 DLGAP5Q15398 846 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ACSBG2Q5FVE4 666 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TMEM214Q6NUQ4 689 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF677Q86XU0 584 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TARS2Q9BW92 718 aaKnown RBP11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TSSK1BQ9BXA7 367 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TRIM55Q9BYV6 548 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 XPNPEP1Q9NQW7 623 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 KRT82Q9NSB4 513 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 SENP1Q9P0U3 644 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF212Q9UDV6 495 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 PCDHA10Q9Y5I2 948 aa11.5□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms