RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 FAM76AQ8TAV0 307 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 FAM172AQ8WUF8 416 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ART4Q93070 314 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 FAM149B1Q96BN6 582 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 RBM41Q96IZ5 413 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 GLT1D1Q96MS3 346 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 DDX23Q9BUQ8 820 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 SLC4A5Q9BY07 1137 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 RHOBTB2Q9BYZ6 727 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 UPF3AQ9H1J1 476 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 EPB41L4BQ9H329 900 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 AAASQ9NRG9 546 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 HOMER3Q9NSC5 361 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 TMEM30AQ9NV96 361 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ASNSD1Q9NWL6 643 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 GPATCH2LQ9NWQ4 482 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 DDX43Q9NXZ2 648 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 NUP205Q92621 2012 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ZNF236Q9UL36 1845 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 SYNJ2BP-COX16A0A087WUM0 186 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 GOLGA8MH3BSY2 632 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 SGK1O00141 431 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PRPSAP2O60256 369 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 TRUB2O95900 331 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PECAM1P16284 738 aaPredicted RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 PTPN1P18031 435 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 ITIH2P19823 946 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 GPD1P21695 349 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 IL4RP24394 825 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 SDC4P31431 198 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ARSEP51690 589 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 GDF10P55107 478 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 CDH6P55285 790 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 HDAC4P56524 1084 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 MAP3K7CLP57077 242 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PITX1P78337 314 aaPredicted RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 OTUD4Q01804 1114 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 SLC6A3Q01959 620 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 GPS1Q13098 491 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 MBTPS1Q14703 1052 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 KYNUQ16719 465 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 CA9Q16790 459 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 UPP1Q16831 310 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 SV2CQ496J9 727 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 DCAF6Q58WW2 860 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 RTN4RL1Q86UN2 441 aaPredicted RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 CCDC89Q8N998 374 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PCSK9Q8NBP7 692 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 MAIP1Q8WWC4 291 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 SLCO2A1Q92959 643 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 EXOC4Q96A65 974 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 PCED1BQ96HM7 432 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 TNIP3Q96KP6 325 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ZNF560Q96MR9 790 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 TXLNGYQ9BZA5 131 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ADAM7Q9H2U9 754 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 CHST12Q9NRB3 414 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 TMPRSS4Q9NRS4 437 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 COX16Q9P0S2 106 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 DDX20Q9UHI6 824 aaKnown RBP4.32□□□□□ -1.72
USP25-208ENST00000478932 ANAPC5Q9UJX4 755 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 NEU2Q9Y3R4 380 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 HEY1Q9Y5J3 304 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 MYO9BQ13459 2157 aa4.32□□□□□ -1.72
USP25-208ENST00000478932 REV3LO60673 3130 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 TRIOO75962 3097 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 GOLGA6L10A6NI86 522 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 FOXO6A8MYZ6 492 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 GABRDO14764 452 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 ZNF623O75123 536 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 CAND2O75155 1236 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 PIAS1O75925 651 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 INHAP05111 366 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 CKBP12277 381 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 RARGP13631 454 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 ATF2P15336 505 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 KLRC2P26717 231 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 LRPAP1P30533 357 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 BRCC3P46736 316 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 VEGFBP49765 207 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 CACNA2D1P54289 1103 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 BCAT1P54687 386 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 COPS2P61201 443 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 YWHAZP63104 245 aaKnown RBP4.31□□□□□ -1.72
USP25-208ENST00000478932 DMTNQ08495 405 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 MGAT3Q09327 533 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 ADIGQ0VDE8 80 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 BST2Q10589 180 aaKnown RBP4.31□□□□□ -1.72
USP25-208ENST00000478932 STILQ15468 1287 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
USP25-208ENST00000478932 KRT71Q3SY84 523 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 MDH1BQ5I0G3 518 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 MAP3K21Q5TCX8 1036 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 SYPL2Q5VXT5 272 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 NPNTQ6UXI9 565 aa4.31□□□□□ -1.72
USP25-208ENST00000478932 DSTYKQ6XUX3 929 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms