RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
CPSF7-211ENST00000477890 SMYD3Q9H7B4 428 aa12.49□□□□□ -0.41
CPSF7-211ENST00000477890 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
CPSF7-211ENST00000477890 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
CPSF7-211ENST00000477890 MYO18AQ92614 2054 aaKnown RBP12.49□□□□□ -0.41
CPSF7-211ENST00000477890 MYH10P35580 1976 aa12.49□□□□□ -0.41
CPSF7-211ENST00000477890 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 SGK1O00141 431 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 POLR2DO15514 142 aaKnown RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 COCHO43405 550 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 EXOC3O60645 756 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 YEATS4O95619 227 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 ATICP31939 592 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 CASP4P49662 377 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 CDH8P55286 799 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 EHHADHQ08426 723 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 BIRC3Q13489 604 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 LY6G5CQ5SRR4 150 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 EMC10Q5UCC4 262 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 IL17RCQ8NAC3 791 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 RLN3Q8WXF3 142 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 OVCA2Q8WZ82 227 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 MAGEF1Q9HAY2 307 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 POLMQ9NP87 494 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 ZDHHC4Q9NPG8 344 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 ARHGEF4Q9NR80 690 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 BCCIPQ9P287 314 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-211ENST00000477890 SH3BP1Q9Y3L3 701 aa12.48□□□□□ -0.41
CPSF7-211ENST00000477890 E2F8A0AVK6 867 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 GIPC1O14908 333 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 MAP3K13O43283 966 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 GRIA2P42262 883 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 KIR2DL1P43626 348 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 AFMP43652 599 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 SLC5A3P53794 718 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 GAD2Q05329 585 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 BMT2Q1RMZ1 405 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 ZNF699Q32M78 642 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 FOXD4L6Q3SYB3 417 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 HSF5Q4G112 596 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 EOGTQ5NDL2 527 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 FOXD4L3Q6VB84 417 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 ARMCX6Q7L4S7 300 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 OLIG1Q8TAK6 271 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 WHAMMQ8TF30 809 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 HMGB4Q8WW32 186 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 PIGKQ92643 395 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 ELMO3Q96BJ8 720 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 OTUB2Q96DC9 234 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 TMEM9BQ9NQ34 198 aa12.47□□□□□ -0.41
CPSF7-211ENST00000477890 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
CPSF7-211ENST00000477890 TNRC6BQ9UPQ9 1833 aaKnown RBP12.46□□□□□ -0.41
CPSF7-211ENST00000477890 USP24Q9UPU5 2620 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 A0A0A0MRY4 1105 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 TCRBV21S2A2A0A5A6 115 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-211ENST00000477890 P2RY2P41231 377 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 TNFRSF4P43489 277 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 IRX4P78413 519 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 CUL4BQ13620 913 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 NCOA4Q13772 614 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 BTBD8Q5XKL5 378 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 PAQR9Q6ZVX9 377 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 LPCAT2Q7L5N7 544 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 TMEFF1Q8IYR6 380 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 PGBD3Q8N328 593 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 FRMD1Q8N878 549 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 NAT16Q8N8M0 369 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 SMARCD1Q96GM5 515 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 TNIP3Q96KP6 325 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 NACA2Q9H009 215 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 CCSER2Q9H7U1 834 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 VRTNQ9H8Y1 702 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-211ENST00000477890 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
CPSF7-211ENST00000477890 GMIPQ9P107 970 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms