RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SLC16A4O15374 487 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 HIP1RO75146 1068 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 OLFM2O95897 454 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 CDK4P11802 303 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 KRT10P13645 584 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 MUTP22033 750 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ACTN2P35609 894 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 GAD2Q05329 585 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 MAPK7Q13164 816 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 SF3A1Q15459 793 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TBC1D25Q3MII6 688 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 LY6G5CQ5SRR4 150 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 C10orf76Q5T2E6 689 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ARHGAP40Q5TG30 622 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 DCAF12L1Q5VU92 463 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 EGFLAMQ63HQ2 1017 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 USP49Q70CQ1 688 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 CHPFQ8IZ52 775 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 NAT16Q8N8M0 369 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TERB1Q8NA31 727 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TMEM161BQ8NDZ6 487 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ERLEC1Q96DZ1 483 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ZNF274Q96GC6 653 aaPredicted RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 PKMYT1Q99640 499 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 PYM1Q9BRP8 204 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 GPR174Q9BXC1 333 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 CPNE5Q9HCH3 593 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ITM2CQ9NQX7 267 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 USP36Q9P275 1121 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 ANKMY1Q9P2S6 941 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 DEC1Q9P2X7 70 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 EIF2B4Q9UI10 523 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 SNX14Q9Y5W7 946 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 SNX11Q9Y5W9 270 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 RAD54BQ9Y620 910 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 SLCO1B1Q9Y6L6 691 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TRIP11Q15643 1979 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TEP1Q99973 2627 aaKnown RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 COL5A1P20908 1838 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 ZNF840PA6NDX5 716 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 KCNJ18B7U540 433 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 HOXC11O43248 304 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 PAPSS1O43252 624 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 C1SP09871 688 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 MAPTP10636 758 aaKnown RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 XBP1P17861 261 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 AFF3P51826 1226 aaKnown RBP7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 UCNP55089 124 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 TMPRSS3P57727 454 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 STRN3Q13033 797 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 PDIA5Q14554 519 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 CFAP221Q4G0U5 840 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 HES3Q5TGS1 186 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 JADE1Q6IE81 842 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 SDE2Q6IQ49 451 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 FBXL19Q6PCT2 694 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 NUDT18Q6ZVK8 323 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 CACTIN-AS1Q8N1I8 211 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 ENGASEQ8NFI3 743 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 ERMNQ8TAM6 284 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 IGSF8Q969P0 613 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 DRC1Q96MC2 740 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 ACBD6Q9BR61 282 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 C17orf75Q9HAS0 396 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 SMPD4Q9NXE4 827 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 CFAP97Q9P2B7 532 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 TBC1D14Q9P2M4 693 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 FTSJ1Q9UET6 329 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 GTF3C4Q9UKN8 822 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 ANKRD6Q9Y2G4 727 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 CPQQ9Y646 472 aa7.85□□□□□ -1.15
SPTLC1-205ENST00000477888 CABIN1Q9Y6J0 2220 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 MUC22E2RYF6 1773 aaPredicted RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 E2F8A0AVK6 867 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 SFI1A8K8P3 1242 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KPNA7A9QM74 516 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 WASH3PC4AMC7 463 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 PRRT4C9JH25 899 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 H0Y8X5 98 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TRAK2O60296 914 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 RFPL3O75679 317 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 OAS1P00973 400 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 IGLV3-19P01714 112 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 GP1BBP13224 206 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 CDC25AP30304 524 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TAF6P49848 677 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 CCT8P50990 548 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TPMTP51580 245 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 USP46P62068 366 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TSPY1Q01534 308 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 DNAJC3Q13217 504 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KYAT1Q16773 422 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 CCDC142Q17RM4 750 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 INTS6LQ5JSJ4 861 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KCNT1Q5JUK3 1230 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms