RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CD58P19256 250 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 TUBP50607 506 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 MAP3K7CLP57077 242 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 TMEM196Q5HYL7 178 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 SPEM1Q8N4L4 309 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 ZBTB44Q8NCP5 570 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 NELFBQ8WX92 580 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 ATP2A3Q93084 1043 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 FAM126AQ9BYI3 521 aaPredicted RBP23.02■■□□□ 1.28
COL9A3-211ENST00000477612 FBXO44Q9H4M3 255 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 CISHQ9NSE2 258 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 CHORDC1Q9UHD1 332 aaPredicted RBP23.02■■□□□ 1.28
COL9A3-211ENST00000477612 FAM186AA6NE01 2351 aa23.02■■□□□ 1.28
COL9A3-211ENST00000477612 RIF1Q5UIP0 2472 aaKnown RBP23.02■■□□□ 1.28
COL9A3-211ENST00000477612 ADORA2BP29275 332 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 GJA4P35212 333 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 IFNAR2P48551 515 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 CCR3P51677 355 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 MARSP56192 900 aaKnown RBP23.01■■□□□ 1.27
COL9A3-211ENST00000477612 CSTF1Q05048 431 aaKnown RBP23.01■■□□□ 1.27
COL9A3-211ENST00000477612 IFRD2Q12894 506 aaPredicted RBP23.01■■□□□ 1.27
COL9A3-211ENST00000477612 PPP1R26Q5T8A7 1209 aaPredicted RBP23.01■■□□□ 1.27
COL9A3-211ENST00000477612 CPA6Q8N4T0 437 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 SLC4A11Q8NBS3 891 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 RBM12Q9NTZ6 932 aaKnown RBP23.01■■□□□ 1.27
COL9A3-211ENST00000477612 KIAA1468Q9P260 1216 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 CPQQ9Y646 472 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 WNT6Q9Y6F9 365 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 R4GN57 208 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 KIAA1549LQ6ZVL6 1849 aa23.01■■□□□ 1.27
COL9A3-211ENST00000477612 BIN1O00499 593 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 PAPSS2O95340 614 aaPredicted RBP23■■□□□ 1.27
COL9A3-211ENST00000477612 ABL1P00519 1130 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 FMO5P49326 533 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 RAD23BP54727 409 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 HECTD3Q5T447 861 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 KLHL10Q6JEL2 608 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 TMEM176AQ96HP8 235 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 ARID3AQ99856 593 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 DUSP16Q9BY84 665 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 LINC00597Q9H2U6 94 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 PCDHGA2Q9Y5H1 932 aa23■■□□□ 1.27
COL9A3-211ENST00000477612 P4HA2O15460 535 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 COCHO43405 550 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 LILRB5O75023 590 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 CXCL12P48061 93 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 CUL2Q13617 745 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 PPP2R5DQ14738 602 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 ZNF394Q53GI3 561 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 ARHGAP17Q68EM7 881 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 DDX42Q86XP3 938 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL9A3-211ENST00000477612 ZFRQ96KR1 1074 aaKnown RBP22.99■■□□□ 1.27
COL9A3-211ENST00000477612 UBXN6Q9BZV1 441 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 ZSCAN32Q9NX65 697 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 GMIPQ9P107 970 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 SCML2Q9UQR0 700 aa22.99■■□□□ 1.27
COL9A3-211ENST00000477612 NFATC1O95644 943 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 GNA14O95837 355 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 LMNAP02545 664 aaKnown RBP22.98■■□□□ 1.27
COL9A3-211ENST00000477612 GALK1P51570 392 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 NR1H3Q13133 447 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 PAK1Q13153 545 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 CCDC40Q4G0X9 1142 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 FSTL4Q6MZW2 842 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 CLEC17AQ6ZS10 378 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 GPRIN1Q7Z2K8 1008 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 ADGRG2Q8IZP9 1017 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 UBR7Q8N806 425 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 EXOC4Q96A65 974 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 HEXIM2Q96MH2 286 aaKnown RBP22.98■■□□□ 1.27
COL9A3-211ENST00000477612 TLR8Q9NR97 1041 aaKnown RBP22.98■■□□□ 1.27
COL9A3-211ENST00000477612 CTNND2Q9UQB3 1225 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 USP3Q9Y6I4 520 aa22.98■■□□□ 1.27
COL9A3-211ENST00000477612 PTPRZ1P23471 2315 aaPredicted RBP22.98■■□□□ 1.27
COL9A3-211ENST00000477612 SLC9A3R1O14745 358 aaPredicted RBP22.97■■□□□ 1.27
COL9A3-211ENST00000477612 MBL2P11226 248 aaPredicted RBP22.97■■□□□ 1.27
COL9A3-211ENST00000477612 DRD1P21728 446 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 KIF11P52732 1056 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 GRSF1Q12849 480 aaKnown RBP eCLIP22.97■■□□□ 1.27
COL9A3-211ENST00000477612 TSSK4Q6SA08 328 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 Q6ZS52 159 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 TRIM59Q8IWR1 403 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 ZNF276Q8N554 614 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 LMO3Q8TAP4 145 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 CCSER2Q9H7U1 834 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 FBRSL1Q9HCM7 1045 aaKnown RBP22.97■■□□□ 1.27
COL9A3-211ENST00000477612 CYLDQ9NQC7 956 aa22.97■■□□□ 1.27
COL9A3-211ENST00000477612 E2F8A0AVK6 867 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 TBXAS1P24557 533 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-211ENST00000477612 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
COL9A3-211ENST00000477612 PGFP49763 221 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 NRLP54845 237 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 YWHAEP62258 255 aaKnown RBP22.96■■□□□ 1.27
COL9A3-211ENST00000477612 SATB1Q01826 763 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 SUMF1Q8NBK3 374 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 P2RY13Q9BPV8 354 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 SMPD4Q9NXE4 827 aa22.96■■□□□ 1.27
COL9A3-211ENST00000477612 ACO1P21399 889 aaKnown RBP22.95■■□□□ 1.26
COL9A3-211ENST00000477612 HOXA6P31267 233 aa22.95■■□□□ 1.26
COL9A3-211ENST00000477612 STX17P56962 302 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms