RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 COBLL1Q53SF7 1204 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 BEND3Q5T5X7 828 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 DEPDC1Q5TB30 811 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SYDE2Q5VT97 1194 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SNX30Q5VWJ9 437 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 CPZQ66K79 652 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 DENND2CQ68D51 928 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 GALNT17Q6IS24 598 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 RWDD4Q6NW29 188 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 PDXDC1Q6P996 788 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 AAGABQ6PD74 315 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 WDR59Q6PJI9 974 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 LRRC74BQ6ZQY2 392 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 RGS9BPQ6ZS82 235 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SMIM5Q71RC9 77 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 TUBA1AQ71U36 451 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 HS2ST1Q7LGA3 356 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 NLRP10Q86W26 655 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 LONP2Q86WA8 852 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SFR1Q86XK3 245 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 VSIG1Q86XK7 387 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SCUBE1Q8IWY4 988 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SLC15A3Q8IY34 581 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SYCE1Q8N0S2 351 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SPICE1Q8N0Z3 855 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 BBS5Q8N3I7 341 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 ZBTB38Q8NAP3 1195 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 FBXO27Q8NI29 283 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 GDAP1Q8TB36 358 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 FNDC8Q8TC99 324 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 NEK9Q8TD19 979 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 UBLCP1Q8WVY7 318 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 CKAP2Q8WWK9 683 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 CASP10Q92851 521 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 ZNF512BQ96KM6 892 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 MAGEB18Q96M61 343 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 BIRC8Q96P09 236 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SERPINB12Q96P63 405 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 INPP4AQ96PE3 977 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 LRRC37BQ96QE4 947 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 DUSP9Q99956 384 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SIKE1Q9BRV8 207 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 ALG1Q9BT22 464 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 TLR10Q9BXR5 811 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 TTYH3Q9C0H2 523 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 Q9H521 79 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 PPCSQ9HAB8 311 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 PLGRKTQ9HBL7 147 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 SPON1Q9HCB6 807 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 METTL5Q9NRN9 209 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 CHST7Q9NS84 486 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 AP5S1Q9NUS5 200 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 FGFR1OP2Q9NVK5 253 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 NMRK1Q9NWW6 199 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 GIN1Q9NXP7 522 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 UBAP1Q9NZ09 502 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 HESX1Q9UBX0 185 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 CNOT8Q9UFF9 292 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 MTRF1LQ9UGC7 380 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 FAM153AQ9UHL3 310 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 TRMT112Q9UI30 125 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 RASAL2Q9UJF2 1139 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 FBXO2Q9UK22 296 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 DSEQ9UL01 958 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 PADI4Q9UM07 663 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 AGAP1Q9UPQ3 857 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 STK38LQ9Y2H1 464 aa4.97□□□□□ -1.61
PTCD3-212ENST00000477520 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 AFDNP55196 1824 aaKnown RBP4.97□□□□□ -1.61
PTCD3-212ENST00000477520 MACROD2A1Z1Q3 448 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 E7EWF7 191 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PGRMC1O00264 195 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PODXLO00592 558 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 AREL1O15033 823 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 AKR1B10O60218 316 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 RANBP6O60518 1105 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PHF2O75151 1096 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 SUPT3HO75486 399 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TCEA3O75764 348 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 GFPT2O94808 682 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 BAIAP3O94812 1187 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ZBED1O96006 694 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 AFPP02771 609 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 SERPINB2P05120 415 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 IGKV5-2P06315 115 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DBHP09172 617 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PDGFRBP09619 1106 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF20P17024 532 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 KRT4P19013 534 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CRABP2P29373 138 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TM4SF1P30408 202 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PHBP35232 272 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PPARGP37231 505 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 MC3RP41968 323 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 RPL5P46777 297 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TMED10P49755 219 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 GUCY2FP51841 1108 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 POLGP54098 1239 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms