RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SLC47A2Q86VL8 602 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 CMTM8Q8IZV2 173 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-205ENST00000477508 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
TOP3A-205ENST00000477508 ELSPBP1Q96BH3 223 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 NOX5Q96PH1 765 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 SLC46A2Q9BY10 475 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 NUCKS1Q9H1E3 243 aaKnown RBP13.83□□□□□ -0.2
TOP3A-205ENST00000477508 PDCL3Q9H2J4 239 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 KCNK12Q9HB15 430 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 OBP2AQ9NY56 170 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 DENND4CQ5VZ89 1909 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
TOP3A-205ENST00000477508 EPHB6O15197 1021 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 TADA3O75528 432 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ABL1P00519 1130 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ZDHHC11BP0C7U3 371 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 HDCP19113 662 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 GPD2P43304 727 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 TKTL1P51854 596 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CYP4F8P98187 520 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 TDGQ13569 410 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-205ENST00000477508 PTPN21Q16825 1174 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 PM20D1Q6GTS8 502 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ARID3BQ8IVW6 561 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-205ENST00000477508 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 SIX6OS1Q8N1H7 587 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 SCML4Q8N228 414 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ZNF397Q8NF99 534 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-205ENST00000477508 ZSWIM3Q96MP5 696 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
TOP3A-205ENST00000477508 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CD320Q9NPF0 282 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CNGB3Q9NQW8 809 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 CHORDC1Q9UHD1 332 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-205ENST00000477508 SORCS3Q9UPU3 1222 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 BDP1A6H8Y1 2624 aa13.82□□□□□ -0.2
TOP3A-205ENST00000477508 A0A1W2PQJ5 194 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 DPYSL4O14531 572 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 GFPT2O94808 682 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 FBXO21O94952 628 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 LSM8O95777 96 aaKnown RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 ZBED1O96006 694 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 CKMP06732 381 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 PNMA6AP0CW24 399 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 ALADP13716 330 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 FERP16591 822 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 PBX1P40424 430 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 RPL34P49207 117 aaKnown RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 HECTD3Q5T447 861 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 DENND1BQ6P3S1 775 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 PARM1Q6UWI2 310 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 TRIM72Q6ZMU5 477 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 CELF5Q8N6W0 485 aaKnown RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 TMEM35BQ8NCS4 154 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 DEPDC1BQ8WUY9 529 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 IRGQQ8WZA9 623 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 FGF14Q92915 247 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 COL25A1Q9BXS0 654 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 XPO4Q9C0E2 1151 aaKnown RBP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 TRPC7Q9HCX4 862 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 ACP6Q9NPH0 428 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 TDP1Q9NUW8 608 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 GMIPQ9P107 970 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.2
TOP3A-205ENST00000477508 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
TOP3A-205ENST00000477508 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 TNFRSF10AO00220 468 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 TULP2O00295 520 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 NRG2O14511 850 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-205ENST00000477508 OAS1P00973 400 aaKnown RBP13.8□□□□□ -0.2
TOP3A-205ENST00000477508 CALCAP01258 141 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 RALAP11233 206 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 CDR2Q01850 454 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 ADIGQ0VDE8 80 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 STXBP5Q5T5C0 1151 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 TANGO2Q6ICL3 276 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 KLHDC10Q6PID8 442 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 TMEM110Q86TL2 294 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 MFSD6LQ8IWD5 586 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 SLC4A5Q9BY07 1137 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 ULBP1Q9BZM6 244 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms