RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DHX33Q9H6R0 707 aaKnown RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 FAM53CQ9NYF3 392 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 TJP2Q9UDY2 1190 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 UBQLN1Q9UMX0 589 aaKnown RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 MYH7P12883 1935 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 CASTOR2A6NHX0 329 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA8CPA6NN73 597 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 PMLP29590 882 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 RPL22P35268 128 aaKnown RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TAF1BQ53T94 588 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SLC39A4Q6P5W5 647 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 IPMKQ8NFU5 416 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 NUDT5Q9UKK9 219 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CNTNAP1P78357 1384 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 A0A1W2PPM1 405 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA8TH3BQL2 631 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 PMPCBO75439 489 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 AP1G2O75843 785 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CD4P01730 458 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CD48P09326 243 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CYP2F1P24903 491 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SLC26A2P50443 739 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TSPY1Q01534 308 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 FAAP100Q0VG06 881 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 HABP4Q5JVS0 413 aaKnown RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 UNC45BQ8IWX7 931 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM192Q8IY95 271 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 PRCCQ92733 491 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 E2F7Q96AV8 911 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 GBP5Q96PP8 586 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TRIM33Q9UPN9 1127 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SHOC2Q9UQ13 582 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM191CA6NGB0 347 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CYB561D2O14569 222 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 ATP5HO75947 161 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 RECQL4O94761 1208 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 NUDT17P0C025 328 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 MX2P20592 715 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 ADIGQ0VDE8 80 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TAF5Q15542 800 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 ZCCHC23Q6ZST2 131 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SLC26A7Q8TE54 656 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 SKA2Q8WVK7 121 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 FAM136AQ96C01 138 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 CELF6Q96J87 481 aaKnown RBP11.45□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 ARMCX1Q9P291 453 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 STXBP5LQ9Y2K9 1186 aa11.45□□□□□ -0.58
COL27A1-204ENST00000477421 KAT6AQ92794 2004 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 NFASCO94856 1347 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 MYH15Q9Y2K3 1946 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 SNX3O60493 162 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 FAM200BP0CF97 657 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 DRD4P21917 467 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 PEX5P50542 639 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ART3Q13508 389 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 KYAT1Q16773 422 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 RIBC1Q8N443 379 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ZCCHC9Q8N567 271 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 TFB1MQ8WVM0 346 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ALKBH8Q96BT7 664 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 EPAS1Q99814 870 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 GRHL1Q9NZI5 618 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 MARF1Q9Y4F3 1742 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 GPR25O00155 361 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 CXCL11O14625 94 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 MYL2P10916 166 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 NQO1P15559 274 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 TPH1P17752 444 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ZNF268Q14587 947 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 KCNT2Q6UVM3 1135 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 PHF13Q86YI8 300 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 PARK7Q99497 189 aaKnown RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 C20orf96Q9NUD7 363 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 SIGLEC16A6NMB1 481 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 USP2O75604 605 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ZWINTO95229 277 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 GLRBP48167 497 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 EFTUD2Q15029 972 aaKnown RBP eCLIP11.44□□□□□ -0.584e-8■■■□□ 17.6
COL27A1-204ENST00000477421 EFHC1Q5JVL4 640 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 ADGRF2Q8IZF7 708 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 FUKQ8N0W3 1084 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 THEM5Q8N1Q8 247 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 SLC25A41Q8N5S1 370 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 BORCS6Q96GS4 357 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 FIZ1Q96SL8 496 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 WWP1Q9H0M0 922 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 VPS33BQ9H267 617 aa11.44□□□□□ -0.58
COL27A1-204ENST00000477421 SLC39A10Q9ULF5 831 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms